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BSR_inoc_148714

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Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_148714_1
unknown

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comp(29..586)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg2 RepID=UPI0003800197
BSR_inoc_148714_2
Pectobacterium wasabiae, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(591..791)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI000344A540
transcriptional regulator
AlpA family transcriptional regulator {ECO:0000313|EMBL:EJS94689.1}; TaxID=1175631 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium wasabiae CFBP 3304.;"
BSR_inoc_148714_3
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1166..1621)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCM3_9GAMM
Preprotein translocase subunit SecB
Preprotein translocase subunit SecB {ECO:0000313|EMBL:AHF01835.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_4
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1618..2169)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCM2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF01836.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2182..2580)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCM1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02367.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_6
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2729..3643)
DNA (915bp) protein (305aa)
Phage integrase family protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ANL5_PELPD
phage integrase family protein
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:EDY86430.1}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
BSR_inoc_148714_trna_2
unknown

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comp(4032..4105)
DNA (74bp)
transferRNA Met
BSR_inoc_148714_7
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4230..5321)
DNA (1092bp) protein (364aa)
Ribosome-binding ATPase YchF n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D9T9_THICA
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_148714_8
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5342..5926)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Peptidyl-tRNA hydrolase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCL9_9GAMM
peptidyl-tRNA hydrolase
BSR_inoc_148714_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5967..6548)
DNA (582bp) protein (194aa)
50S ribosomal protein L25 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCL8_9GAMM
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_10
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6727..7686)
DNA (960bp) protein (320aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCL7_9GAMM
BSR_inoc_148714_trna_1
unknown

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comp(7741..7812)
DNA (72bp)
transferRNA Gln
BSR_inoc_148714_11
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7937..9649)
DNA (1713bp) protein (571aa)
TPR repeat-containing protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D892_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00873.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_12
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9649..11535)
DNA (1887bp) protein (629aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase 4 subunit B n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IR3_THICR
BSR_inoc_148714_13
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11799..12452
DNA (654bp) protein (218aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D894_9GAMM
pyridoxamine 5'-phosphate oxidase
BSR_inoc_148714_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12452..13159
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000368E712
uracil-DNA glycosylase
Tax=CG_Thiomicrospira_01
BSR_inoc_148714_15
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13520..15244
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000374EA33
Chemotaxis protein {ECO:0000313|EMBL:KDN95722.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
methyl-accepting chemotaxis sensory transducer
BSR_inoc_148714_16
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15256..15951)
DNA (696bp) protein (232aa)
OmpA/MotB family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IR7_THICR
OmpA/MotB protein
OmpA/MotB family protein {ECO:0000313|EMBL:ABB40956.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_148714_17
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15948..16685)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035EDF43
OmpA/MotB protein
OmpA/MotB family protein {ECO:0000313|EMBL:ABB40955.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_148714_18
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16705..17520)
DNA (816bp) protein (272aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IR9_THICR
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ABB40954.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_148714_19
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17523..18269)
DNA (747bp) protein (249aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D899_9GAMM
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AHF00868.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_148714_20
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18266..18802)
DNA (537bp) protein (179aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IS1_THICR
histidinol-phosphate phosphatase
BSR_inoc_148714_21
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18868..20943)
DNA (2076bp) protein (692aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Glycine--tRNA ligase beta subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IS2_THICR
BSR_inoc_148714_22
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20940..22034)
DNA (1095bp) protein (365aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IS3_THICR
BSR_inoc_148714_23
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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22054..22299
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037C878A
conserved hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO45664.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
BSR_inoc_148714_24
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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22454..23734
DNA (1281bp) protein (427aa)
Peptidase M23 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8V6_THICA
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AEG31956.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_148714_25
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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23768..24829
DNA (1062bp) protein (354aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8A5_9GAMM
anhydro-N-acetylmuramic acid kinase
BSR_inoc_148714_26
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25010..25780)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8A6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDN96472.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
BSR_inoc_148714_27
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25941..26360)
DNA (420bp) protein (140aa)
Putative transcriptional regulator, ModE family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IG7_THICR
ModE family transcriptional regulator
Putative transcriptional regulator, ModE family {ECO:0000313|EMBL:ABB41056.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_148714_28
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26555..27586
DNA (1032bp) protein (344aa)
Diguanylate cyclase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8A8_9GAMM
diguanylate cyclase
Diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:ABB41053.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Displaying items 1-30 of 91 in total

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