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BSR_inoc_61849

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_61849_1
unknown

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comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

BSR_inoc_61849_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(462..1499)
DNA (1038bp) protein (346aa)
queA; S-adenosylmethionine tRNA ribosyltransferase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D811_9GAMM
BSR_inoc_61849_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1669..3309)
DNA (1641bp) protein (547aa)
Flagellar hook protein FlgE n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FL0_THICR
hypothetical protein
Flagellar hook protein FlgE {ECO:0000313|EMBL:ABB42063.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_61849_4
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3332..4009)
DNA (678bp) protein (226aa)
Flagellar hook capping protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D813_9GAMM
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:AHF01051.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_61849_5
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4015..4431)
DNA (417bp) protein (139aa)
flagellar basal body rod protein FlgC n=1 Tax=Thiomicrospira halophila RepID=UPI000381CC2A
flagellar basal body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_61849_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4431..4832)
DNA (402bp) protein (134aa)
Flagellar basal body rod protein FlgB n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FK7_THICR
flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_61849_7
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5124..6317)
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FK6_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB42067.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_61849_8
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6333..7292)
DNA (960bp) protein (320aa)
chemotaxis protein CheW n=1 Tax=Thiomicrospira halophila RepID=UPI00036AB02B
chemotaxis protein CheW
Chemotaxis protein CheW {ECO:0000313|EMBL:AHF01681.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_61849_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7381..8109
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000363823B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02341.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_61849_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8229..8540
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036F9AD9
flagellar biosynthesis anti-sigma factor FlgM
Tax=CG_Thiomicrospira_01
BSR_inoc_61849_11
unknown

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8550..8972
DNA (423bp) protein (141aa)
BSR_inoc_61849_12

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9036..9608
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=uncultured microorganism RepID=I2FJH3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:BAM15158.2}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
BSR_inoc_61849_13
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9623..10072)
DNA (450bp) protein (150aa)
PAS sensor protein n=1 Tax=Pseudomonas caeni RepID=UPI0003B5F4C4
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:AHF00537.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_61849_14
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10168..10560)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8R8_9GAMM
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_61849_15
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10571..10999)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8R9_9GAMM
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_61849_16
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11298..12362
DNA (1065bp) protein (355aa)
hydroxymethylglutaryl-CoA reductase (NADPH) (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl-coenzyme A reductase {ECO:0000313|EMBL:ABB42309.1}; EC=1.1.1.34 {ECO:0000313|EMBL:ABB42309.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EW4_THICR
BSR_inoc_61849_17
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12355..13404
DNA (1050bp) protein (350aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000362614D
isopentenyl-diphosphate delta-isomerase
BSR_inoc_61849_18
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13401..14564
DNA (1164bp) protein (388aa)
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCH2_9GAMM
3-hydroxy-3-methylglutaryl-CoA synthase
3-hydroxy-3-methylglutaryl-CoA synthase {ECO:0000313|EMBL:AHF01881.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_61849_19
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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14561..15586
DNA (1026bp) protein (342aa)
Mevalonate kinase {ECO:0000313|EMBL:ABB42324.1}; EC=2.7.1.36 {ECO:0000313|EMBL:ABB42324.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000377CFB5
GHMP kinase
BSR_inoc_61849_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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15573..16523
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000373BC23
GHMP kinase
Tax=CG_Thiomicrospira_01
BSR_inoc_61849_21
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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16516..17118
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036F21CE
PnuC-like transporter linked to Choline/ethanolamine kinase and OMR
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83801.1}; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
BSR_inoc_61849_22
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17115..17999)
DNA (885bp) protein (295aa)
Phosphotransferase family protein n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XHD1_METNJ
phosphotransferase family protein
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83800.1}; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
BSR_inoc_61849_23
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18057..18275)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D9E2_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32069.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_61849_24
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18329..19255)
DNA (927bp) protein (309aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AHF01755.1}; EC=2.6.1.42 {ECO:0000313|EMBL:AHF01755.1};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Branched-chain amino acid aminotransferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC49_9GAMM
BSR_inoc_61849_25
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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19690..20862
DNA (1173bp) protein (391aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Acetylornithine aminotransferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC50_9GAMM
acetylornithine aminotransferase
BSR_inoc_61849_26
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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20874..21779
DNA (906bp) protein (302aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Ornithine carbamoyltransferase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC51_9GAMM
ornithine carbamoyltransferase
BSR_inoc_61849_27
unknown

Not on your lists

22132..22386
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000370B477
BSR_inoc_61849_28
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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22383..22808
DNA (426bp) protein (142aa)
PilT protein domain protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PGJ3_9CYAN
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:AFY31652.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
BSR_inoc_61849_29
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22891..23304)
DNA (414bp) protein (138aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
plasmid stabilization protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000362C5F4
putative nucleic acid-binding protein, contains PIN domain
BSR_inoc_61849_30
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23301..23600)
DNA (300bp) protein (100aa)
plasmid stabilization protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036275D9
stbC; plasmid stability protein StbC
Plasmid stability protein StbC {ECO:0000313|EMBL:AEI79640.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Displaying items 1-30 of 94 in total

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