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BSR_inoc_142623

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_142623_1
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..246)
-----------------
DNA (246bp)
protein (82aa)
Transposase IS1634 family n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z3W1_FLABF
transposase IS1634 family
Transposase IS1634 family {ECO:0000313|EMBL:CCB68292.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
BSR_inoc_142623_2
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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407..1642
-----------------
DNA (1236bp)
protein (412aa)
Citrate transporter id=2037165 bin=GWE2_Bacteroidetes_42_24 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Na+/H+ antiporter NhaD
Tax=BJP_IG2069_Spirochaetales_48_31
BSR_inoc_142623_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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1729..2928
-----------------
DNA (1200bp)
protein (400aa)
Putative uncharacterized protein id=4497690 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
BSR_inoc_142623_4
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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2915..4489
-----------------
DNA (1575bp)
protein (525aa)
Putative uncharacterized protein id=1778941 bin=GWE2_Bacteroidetes_42_24 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
BSR_inoc_142623_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4631..5200)
-----------------
DNA (570bp)
protein (190aa)
Putative uncharacterized protein id=1970010 bin=GWE2_Bacteroidetes_42_39 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
BSR_inoc_142623_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(5777..7021)
-----------------
DNA (1245bp)
protein (415aa)
Transcriptional regulator id=4500773 bin=GWF2_Bacteroidetes_43_11 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Fis family transcriptional regulator
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_142623_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7510..8571)
-----------------
DNA (1062bp)
protein (354aa)
Putative uncharacterized protein id=3503794 bin=GWC2_Bacteroidetes_46_850 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_inoc_142623_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8684..10891)
-----------------
DNA (2208bp)
protein (736aa)
Heterodisulfide reductase, subunit A id=3503792 bin=GWC2_Bacteroidetes_46_850 species=Vulcanisaeta moutnovskia genus=Vulcanisaeta taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
4Fe-4S ferredoxin
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_inoc_142623_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10982..13780)
-----------------
DNA (2799bp)
protein (933aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=2063359 bin=GWD2_Bacteroidales_45_23 species=Thermoplasmatales archaeon SCGC AB-540-F20 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
NADPH-dependent glutamate synthase beta chain-like oxidoreductase
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_inoc_142623_10
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13918..14289)
-----------------
DNA (372bp)
protein (124aa)
Methyl-viologen-reducing hydrogenase delta subunit id=1950661 bin=GWB2_Bacteroidetes_32_14 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
BSR_inoc_142623_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(14379..14630)
-----------------
DNA (252bp)
protein (84aa)
SirA-like domain-containing protein id=2063364 bin=GWD2_Bacteroidales_45_23 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_inoc_142623_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(14747..15313)
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein id=2063367 bin=GWD2_Bacteroidales_45_23 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_inoc_142623_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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15441..16118
-----------------
DNA (678bp)
protein (226aa)
Crp/Fnr family transcriptional regulator id=2063370 bin=GWD2_Bacteroidales_45_23 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_inoc_142623_14
unknown

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16111..16275
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

BSR_inoc_142623_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16221..16952)
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AGJ2_9PORP
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CEA16590.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
BSR_inoc_142623_16
bacterium UASB270, Bacteria

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comp(17256..18902)
-----------------
DNA (1647bp)
protein (549aa)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M9A6_9EURY
UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:GAK61123.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
UDP-glucose/GDP-mannose dehydrogenase
BSR_inoc_142623_17
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(19102..21564)
-----------------
DNA (2463bp)
protein (821aa)
Phenylalanine--tRNA ligase beta subunit id=4500772 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
pheT; phenylalanine--tRNA ligase, beta subunit
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_142623_18
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(21630..23729)
-----------------
DNA (2100bp)
protein (700aa)
ATP-dependent DNA helicase RecG id=4500771 bin=GWF2_Bacteroidetes_43_11 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
ATP-dependent DNA helicase RecG
Tax=CG_Bacteroid_01
BSR_inoc_142623_19
unknown

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comp(23870..24055)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

BSR_inoc_142623_20
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24105..25907
-----------------
DNA (1803bp)
protein (601aa)
Penicillin-binding protein 2 id=1902312 bin=GWE2_Bacteroidetes_42_24 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
penicillin-binding protein 2
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_142623_21
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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25904..27175
-----------------
DNA (1272bp)
protein (424aa)
Rod shape-determining protein RodA id=3906862 bin=GWF2_Bacteroidetes_43_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
rod shape-determining protein RodA
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_142623_22
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27424..28119
-----------------
DNA (696bp)
protein (232aa)
SAM-dependent methyltransferase {ECO:0000313|EMBL:KHS56401.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
SAM-dependent methyltransferase id=3906860 bin=GWF2_Bacteroidetes_43_11 species=Methanoplanus petrolearius genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
SAM-dependent methyltransferase
BSR_inoc_142623_23
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28268..29167
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein id=4837599 bin=GWA2_Bacteroidetes_A19_40_15 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
PfkB domain protein
Tax=GWA2_Bacteroidetes_40_15_curated
BSR_inoc_142623_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29164..29994
-----------------
DNA (831bp)
protein (277aa)
Rhamnulose-1-phosphate aldolase id=4301065 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase
Tax=GWF2_Bacteroidetes_41_31_curated
BSR_inoc_142623_25
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30096..32048
-----------------
DNA (1953bp)
protein (651aa)
Putative uncharacterized protein id=1837300 bin=GWE2_Bacteroidetes_42_24 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
transglutaminase domain-containing protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_142623_26
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32156..32731)
-----------------
DNA (576bp)
protein (192aa)
Indolepyruvate ferredoxin oxidoreductase, beta subunit id=2000475 bin=GWE2_Bacteroidetes_42_24 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
putative indolepyruvate ferredoxin oxidoreductase, beta subunit
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_142623_27
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32772..34385)
-----------------
DNA (1614bp)
protein (538aa)
Indolepyruvate ferredoxin oxidoreductase id=2000474 bin=GWE2_Bacteroidetes_42_24 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
iorA; Indolepyruvate ferredoxin oxidoreductase subunit alpha
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_142623_28
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(34550..34702)
-----------------
DNA (153bp)
protein (51aa)
Transposase, IS4 family id=1788153 bin=GWE2_Bacteroidetes_42_24 species=Prevotella timonensis genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_43_11_curated
Displaying 28 items

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