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BSR_inoc_6618

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_6618_1
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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2..487
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYN2_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI61554.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
BSR_inoc_6618_2
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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484..1404
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYN1_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI61553.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
BSR_inoc_6618_3
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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comp(1394..1645)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037DC7AC
Tax=RBG_16_Euryarchaeota_62_10_curated
BSR_inoc_6618_4
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1654..1935)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000376ADF0
Uncharacterized protein {ECO:0000313|EMBL:EMR75187.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
hypothetical protein
BSR_inoc_6618_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2041..2499)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003600F20
transcription regulator, putative, ArsR family
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
BSR_inoc_6618_6
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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2552..3223
DNA (672bp) protein (224aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037A1773
fibrillarin
BSR_inoc_6618_7
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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comp(3225..3707)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00036A3E89
GCN5-like N-acetyltransferase
Tax=BJP_IG2102_Coriobacteriales_64_17
BSR_inoc_6618_8
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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3773..4150
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4N6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25675.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_6618_9
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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4229..4687
DNA (459bp) protein (153aa)
30S ribosomal protein S15 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7S4_9EURY
rps15p; 30S ribosomal protein S15P
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_6618_10
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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4695..6056
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362F589
putative single-stranded-DNA-specific exonuclease
Putative single-stranded-DNA-specific exonuclease {ECO:0000313|EMBL:AGN25677.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_6618_11
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(6043..7023)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375ECDA
UGMP family protein
UGMP family protein {ECO:0000313|EMBL:AGN25678.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_6618_12
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(7040..7270)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T597_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25679.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_6618_trna_1
unknown

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7401..7473
DNA (73bp)
transferRNA Val
BSR_inoc_6618_13
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7496..7924)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D4Y9_9RHIZ
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KCZ86261.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
glyoxalase/bleomycin resistance protein/dioxygenase
BSR_inoc_6618_14
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8115..8783
DNA (669bp) protein (223aa)
Riboflavin biosynthesis protein RibD C-domain protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYV3_METCG
riboflavin biosynthesis protein RibD C-domain-containing protein
Riboflavin biosynthesis protein RibD C-domain protein {ECO:0000313|EMBL:AEB67730.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
BSR_inoc_6618_15
unknown

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8832..9104
DNA (273bp) protein (91aa)

This feature has no annotations

BSR_inoc_6618_16
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9105..9767)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F5E2D
transcriptional regulator (contains V4R domain), ArsR family
Transcriptional regulator (Contains V4R domain), ArsR family {ECO:0000313|EMBL:AFD01184.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
BSR_inoc_6618_17
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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9968..10978
DNA (1011bp) protein (337aa)
putative methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Putative methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; MTNA-like protein {ECO:0000256|HAMAP-Rule:MF_01678}; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DCDC1
BSR_inoc_6618_18
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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10975..11586
DNA (612bp) protein (204aa)
Ribulose-5-phosphate 4-epimerase-related epimerase/aldolase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8G7_9EURY
Ribulose-5-phosphate 4-epimerase-related epimerase/aldolase
Ribulose-5-phosphate 4-epimerase-related epimerase/aldolase {ECO:0000313|EMBL:AGN26949.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_6618_19
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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11591..12682
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C0B2E
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit {ECO:0000313|EMBL:AGN26948.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_6618_20

Not on your lists


12726..13112
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036320C7
Eukaryotic initiation factor 5A hypusine (EIF-5A) {ECO:0000313|EMBL:EQD48897.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
translation initiation factor IF-5A
BSR_inoc_6618_21
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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13129..13980
DNA (852bp) protein (284aa)
speB; agmatinase (EC:3.5.3.11)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000370DA32
Tax=RBG_16_Euryarchaeota_62_10_curated
BSR_inoc_6618_22

Not on your lists

13981..14547
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M774_GEODF
Marine sediment metagenome DNA, contig: S01H1_S24055 {ECO:0000313|EMBL:GAG14141.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BSR_inoc_6618_23
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(14548..14949)
DNA (402bp) protein (134aa)
bifunctional phosphomannomutase/phosphoglucomutase (EC:5.4.2.8)
Bifunctional phosphomannomutase/phosphoglucomutase {ECO:0000313|EMBL:AGN26946.1}; EC=5.4.2.8 {ECO:0000313|EMBL:AGN26946.1};; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360BBF5
Displaying 24 items

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