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BSR_inoc_73404

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_73404_1

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1..393
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S06H3_S10558 {ECO:0000313|EMBL:GAI40466.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=2698990 bin=GWC1_Spirochaetes_27_15 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
BSR_inoc_73404_2
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(570..911)
DNA (342bp) protein (114aa)
Predicted transcription regulator n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5P2_UNCMA
transcription regulator
Predicted transcription regulator {ECO:0000313|EMBL:CAJ36301.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
BSR_inoc_73404_3
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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1019..1267
DNA (249bp) protein (83aa)
Putative 4-oxalocrotonate tautomerase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWK6_METPS
putative 4-oxalocrotonate tautomerase
Putative 4-oxalocrotonate tautomerase {ECO:0000313|EMBL:BAI60828.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
BSR_inoc_73404_4
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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1639..2355
DNA (717bp) protein (239aa)
Putative uncharacterized protein id=3266978 bin=GWF2_Bacteroidetes_49_14 species=Microlunatus phosphovorus genus=Microlunatus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
Tax=GWF2_Bacteroidetes_49_14_curated
BSR_inoc_73404_5
Dehalogenimonas lykanthroporepellens, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

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comp(2181..3095)
DNA (915bp) protein (305aa)
cysteine synthase n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375AD1F
cysteine synthase
Cysteine synthase {ECO:0000313|EMBL:ADJ25563.1}; TaxID=552811 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061; / BL-DC-9).;"
BSR_inoc_73404_6
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3199..3402)
DNA (204bp) protein (68aa)
Helix-turn-helix-containing transcriptional regulator, XRE family n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VB5_METBU
XRE family transcriptional regulator
Helix-turn-helix-containing transcriptional regulator, XRE family {ECO:0000313|EMBL:ABE52611.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
BSR_inoc_73404_7
unknown

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comp(3408..3845)
DNA (438bp) protein (146aa)

This feature has no annotations

BSR_inoc_73404_8
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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comp(3972..4301)
DNA (330bp) protein (110aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T968_9ARCH
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
Tax=CG_Anaero_02
BSR_inoc_73404_9

Not on your lists

4380..5270
DNA (891bp) protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN25807.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidohydrolase 2 id=1241494 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
amidohydrolase 2
BSR_inoc_73404_10

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5317..6207
DNA (891bp) protein (297aa)
Amidohydrolase 2 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9STS7_CLOC7
Uncharacterized protein {ECO:0000313|EMBL:KKN25807.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidohydrolase 2
BSR_inoc_73404_11
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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comp(6208..6729)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003806AD5
nitroreductase
Tax=RBG_13_Euryarchaeota_57_23_curated
BSR_inoc_73404_12
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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6870..7403
DNA (534bp) protein (178aa)
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
BSR_inoc_73404_trna_1
unknown

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7452..7549
DNA (98bp)
transferRNA Arg
BSR_inoc_73404_13
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8060..8638
DNA (579bp) protein (193aa)
farnesyl cysteine carboxyl-methyltransferase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4D0E9
Uncharacterized protein {ECO:0000313|EMBL:EKU99527.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
isoprenylcysteine carboxyl methyltransferase
BSR_inoc_73404_14

Not on your lists

8707..9954
DNA (1248bp) protein (416aa)
Major facilitator transporter n=1 Tax=Vibrio caribbenthicus ATCC BAA-2122 RepID=E3BLC3_9VIBR
Marine sediment metagenome DNA, contig: S01H1_L03499 {ECO:0000313|EMBL:GAF71624.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
major facilitator superfamily protein
BSR_inoc_73404_15
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

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comp(10132..11235)
DNA (1104bp) protein (368aa)
Tax=RBG_13_Euryarchaeota_61_15_curated
BSR_inoc_73404_16
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

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comp(11235..11708)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZR29_THELI
hypothetical protein
Tax=RBG_13_Euryarchaeota_61_15_curated
BSR_inoc_73404_17
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(11747..12682)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D06AE
hypothetical protein
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56351.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
BSR_inoc_73404_18
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(12704..14284)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C3503
alpha-isopropylmalate/homocitrate synthase family transferase
Alpha-isopropylmalate/homocitrate synthase family transferase {ECO:0000313|EMBL:AGN25883.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_73404_19
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14362..15384)
DNA (1023bp) protein (341aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:AGN25882.1}; EC=1.1.1.3 {ECO:0000313|EMBL:AGN25882.1};; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037CC389
BSR_inoc_73404_20
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(15386..15883)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003643B70
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:AGN25881.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_73404_trna_3
unknown

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comp(16005..16102)
DNA (98bp)
transferRNA Ser
BSR_inoc_73404_21
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(16153..16935)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C4462
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AGN25880.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_73404_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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17040..17813
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035CFD43
NAD+ synthetase
Tax=RBG_16_Euryarchaeota_68_12_curated
BSR_inoc_73404_23
unknown

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comp(17814..18347)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000373FFE3
BSR_inoc_73404_trna_2
unknown

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18389..18463
DNA (75bp)
transferRNA Glu
BSR_inoc_73404_24
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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18512..19096
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BP50_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK62125.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
BSR_inoc_73404_25

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19086..20075
DNA (990bp) protein (330aa)
Tyrosine recombinase XerD protein {ECO:0000313|EMBL:KEQ57432.1}; EC=3.2.1.23 {ECO:0000313|EMBL:KEQ57432.1};; TaxID=1502293 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-N04.;"
Site-specific recombinase XerD n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNB4_9EURY
Site-specific recombinase XerD
BSR_inoc_73404_26
unknown

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comp(20130..20432)
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 29 items

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