ggKbase home page

BSR_inoc_104771

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_104771_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..572)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003721A31
regulatory protein
MoxR-related protein {ECO:0000313|EMBL:AKB62988.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
BSR_inoc_104771_2
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

680..2611
DNA (1932bp) protein (644aa)
Hydantoinase/oxoprolinase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8C7_9EURY
hydantoinase/oxoprolinase
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:AGN26909.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_104771_3
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

2649..3758
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000373AEA1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Tax=CG_OP9-01
BSR_inoc_104771_4
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

3795..4982
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036AAC59
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25522.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_104771_5
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(4984..7278)
DNA (2295bp) protein (765aa)
Fibronectin type III domain protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TD24_ACIB4
Fibronectin type III domain protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ADD08459.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
BSR_inoc_104771_trna_2
unknown

Not on your lists

comp(7319..7390)
DNA (72bp)
transferRNA Thr
BSR_inoc_104771_6
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

7484..9403
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C81D5
putative RNA-binding protein, eukaryotic snRNP -like protein
Putative RNA-binding protein, eukaryotic snRNP-like protein {ECO:0000313|EMBL:AGN25534.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_104771_trna_1
unknown

Not on your lists

comp(9410..9483)
DNA (74bp)
transferRNA Arg
BSR_inoc_104771_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9669..9860)
DNA (192bp) protein (64aa)
30S ribosomal protein S17e n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T862_9EURY
rps17E; 30S ribosomal protein S17e
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_104771_8
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9899..10573)
DNA (675bp) protein (225aa)
Thymidylate synthase thyX (EC:2.1.1.-)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environmental samples.;" source="Methanoculleus sp. CAG:1088.;"
Thymidylate synthase ThyX n=2 Tax=Euryarchaeota RepID=M9SF89_9EURY
BSR_inoc_104771_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10611..11309)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F6032
pheromone shutdown -like protein (traB)
Tax=RBG_16_Euryarchaeota_68_12_curated
BSR_inoc_104771_10
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11363..12019
DNA (657bp) protein (219aa)
Phosphoserine phosphatase {ECO:0000313|EMBL:EMR74328.1}; EC=3.1.3.3 {ECO:0000313|EMBL:EMR74328.1};; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
Phosphoserine phosphatase (EC:3.1.3.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003683B2B
BSR_inoc_104771_11
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12011..12640)
DNA (630bp) protein (210aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EED9_PYRF1
BSR_inoc_104771_12
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(12666..13265)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003809A85
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
BSR_inoc_104771_13
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(13270..13872)
DNA (603bp) protein (201aa)
Zn-dependent hydrolase, including glyoxylase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4N7_9EURY
Zn-dependent hydrolase, including glyoxylase
Zn-dependent hydrolase, including glyoxylase {ECO:0000313|EMBL:AGN25499.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_104771_14
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(13851..14744)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B7929
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AGN25498.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_104771_15
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14816..15394
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362BB31
HemK-related putative methylase
HemK-related putative methylase {ECO:0000313|EMBL:AGI48475.1}; TaxID=1054217 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon BRNA1.;"
BSR_inoc_104771_16
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(15372..17231)
DNA (1860bp) protein (620aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036F5F48
glutamyl-tRNA(Gln) amidotransferase subunit E
BSR_inoc_104771_17
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(17231..17728)
DNA (498bp) protein (166aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|HAMAP-Rule:MF_00586, ECO:0000256|RuleBase:RU004457}; Short=Glu-ADT subunit D {ECO:0000256|HAMAP-Rule:MF_00586};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00586, ECO:0000256|RuleBase:RU004457};; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D4958
glutamyl-tRNA(Gln) amidotransferase subunit D
Displaying 19 items

View Taxonomy