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BSR_inoc_212714

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_212714_1
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1..351)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003780283
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25939.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_2
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(566..1348)
DNA (783bp) protein (261aa)
Translation initiation factor IF-2 subunit alpha n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4S2_9EURY
translation initiation factor IF-2 subunit alpha
Translation initiation factor IF-2 subunit alpha {ECO:0000313|EMBL:AGN25937.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_3
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1348..1521)
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8F0_9EURY
rps27e; 30S ribosomal protein S27e
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_4
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1527..1805)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F015E
rpl44e; 50S ribosomal protein L44e
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_5
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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2292..2663
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D95B4
transcriptional regulator, TrmB
Tax=RBG_16_Euryarchaeota_62_10_curated
BSR_inoc_212714_6
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(2664..3338)
DNA (675bp) protein (225aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
Ribose-5-phosphate isomerase A n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T971_9EURY
BSR_inoc_212714_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3340..4047)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380CCAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN25932.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_8
unknown

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comp(4044..4244)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003756845
BSR_inoc_212714_9
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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4290..4961
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000363E2B6
ATP-binding region
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56945.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
BSR_inoc_212714_10
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4945..5439)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037FF4B1
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGN25930.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(5436..5993)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037FF4B1
Alkyl hydroperoxide reductase subunit C-like protein
Alkyl hydroperoxide reductase subunit C-like protein {ECO:0000313|EMBL:AIE83388.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
BSR_inoc_212714_12
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6246..7361
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003621153
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB85778.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
BSR_inoc_212714_13
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(7358..8299)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D7D20
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AGN25917.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_14
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(8320..8886)
DNA (567bp) protein (189aa)
dITPase (EC:3.6.1.15)
DITPase {ECO:0000313|EMBL:AGI48344.1}; EC=3.6.1.15 {ECO:0000313|EMBL:AGI48344.1};; TaxID=1054217 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon BRNA1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037593AD
BSR_inoc_212714_15
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8883..9497)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E55C1
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGN25919.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_16
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(9511..11196)
DNA (1686bp) protein (562aa)
DEAD/DEAH box helicase id=18316168 bin=Nanosalinarum tax=Nanosalinarum
Rad3-related DNA helicase {ECO:0000313|EMBL:EGQ39936.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
hypothetical protein
BSR_inoc_212714_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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11315..11992
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YLN6_9EURY
conserved hypothetical protein TIGR00266
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
BSR_inoc_212714_18
unknown

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11998..12264
DNA (267bp) protein (89aa)

This feature has no annotations

BSR_inoc_212714_19
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

12261..12971
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037AEB38
radB; DNA repair and recombination protein RadB
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_212714_20
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(12947..13483)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000371E761
Polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:AGN25921.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
Displaying 20 items

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