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BSR_inoc_38688

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_38688_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..549)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AWC1_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:EFR39534.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
BSR_inoc_38688_2
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(546..1406)
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
ABC transporter, ATP-binding protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NS91_9FIRM
cbiO2; cobalt ABC transporter ATP-binding subunit
BSR_inoc_38688_3
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1397..2212)
DNA (816bp) protein (272aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
ABC transporter, ATP-binding protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NS90_9FIRM
cbiO2; cobalt import ATP-binding protein cbio 1
BSR_inoc_38688_4
Clostridium sp. CAG:568, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2314..2706)
DNA (393bp) protein (131aa)
50S ribosomal protein L17 n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZFJ6_9CLOT
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;"
rplQ; 50S ribosomal protein L17
BSR_inoc_38688_5
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2725..3675)
DNA (951bp) protein (317aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DQ46_9FIRM
rpoA; DNA-directed RNA polymerase subunit alpha
BSR_inoc_38688_6
Eggerthia catenaformis, Eggerthia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3723..4124)
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2PA12_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=999415 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Eggerthia.;" source="Eggerthia catenaformis OT 569 = DSM 20559.;"
rpsK; 30S ribosomal protein S11
BSR_inoc_38688_7
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

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comp(4143..4520)
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5VZ98_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
rpsM; 30S ribosomal protein S13
BSR_inoc_38688_8
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(4538..4651)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CEB7_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
50S ribosomal protein L36
BSR_inoc_38688_9
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4673..4891)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DR02_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
infA; putative translation initiation factor IF-1
BSR_inoc_38688_10
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

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comp(4905..5651)
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
map; methionine aminopeptidase (EC:3.4.11.18)
methionine aminopeptidase n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034AF458
BSR_inoc_38688_11
Bacillus smithii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5651..6298)
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=665952 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus smithii 7_3_47FAA.;"
Adenylate kinase n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QN72_9BACI
adenylate kinase
BSR_inoc_38688_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6314..7627)
DNA (1314bp) protein (438aa)
Protein translocase subunit SecY n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6E9_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
secY; preprotein translocase subunit SecY
BSR_inoc_38688_13
Bacillus subterraneus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7629..8069)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X7N3_9BACL
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=285983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subterraneus.;"
rplO; ribosomal protein L15
BSR_inoc_38688_14
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

Not on your lists


comp(8100..8708)
DNA (609bp) protein (203aa)
30S ribosomal protein S5 n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5V618_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
SSU ribosomal protein S5P
BSR_inoc_38688_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8721..9077)
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2X2_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LSU ribosomal protein L18P
BSR_inoc_38688_16
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9101..9643)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1Y7G8_ANEAE
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
50S ribosomal protein L6
BSR_inoc_38688_17
Acholeplasma laidlawii, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(9655..10047)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Acholeplasma laidlawii (strain PG-8A) RepID=RS8_ACHLI
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=441768 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma laidlawii (strain PG-8A).;"
BSR_inoc_38688_18
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(10274..10825)
DNA (552bp) protein (184aa)
50S ribosomal protein L5 id=1888399 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
50S ribosomal protein L5
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_38688_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10838..11125)
DNA (288bp) protein (96aa)
50S ribosomal protein L24 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QKQ8_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
rplX; 50S ribosomal protein L24
Displaying 19 items

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