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BSR_Ace_UAPBR_middle_p_200079

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_200079_1
unknown

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_200079_2
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

593..1243
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TC43_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR34120.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
cytoplasmic protein
BSR_Ace_UAPBR_middle_p_200079_3
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1373..1663)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KL26_RHOSK
CRISPR-associated protein, Cas2 family
Tax=BJP_08E140C01_Roseovarius_63_250
BSR_Ace_UAPBR_middle_p_200079_4
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1665..2699)
DNA (1035bp) protein (345aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Ketogulonicigenium vulgare (strain Y25) RepID=E3F0U9_KETVY
CRISPR-associated protein, Cas1 family
BSR_Ace_UAPBR_middle_p_200079_5
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2696..3328)
DNA (633bp) protein (211aa)
CRISPR-associated exonuclease, Cas4 family id=2990671 bin=GWF1_Rhodobacteraceae_65_7 species=Ketogulonicigenium vulgare genus=Ketogulonicigenium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
CRISPR-associated exonuclease, Cas4 family
Tax=GWF1_Rhodobacteraceae_65_7_curated
BSR_Ace_UAPBR_middle_p_200079_6
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3569..3736)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO59949.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
BSR_Ace_UAPBR_middle_p_200079_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3961..4872)
DNA (912bp) protein (304aa)
CRISPR-associated protein, TM1801 family id=2990665 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
CRISPR-associated protein, TM1801 family
Tax=GWF1_Rhodobacteraceae_65_7_curated
BSR_Ace_UAPBR_middle_p_200079_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4880..6742)
DNA (1863bp) protein (621aa)
CRISPR-associated protein, Csd1 family id=2990656 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
CRISPR-associated protein, Csd1 family
Tax=GWF1_Rhodobacteraceae_65_7_curated
BSR_Ace_UAPBR_middle_p_200079_9
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6739..7437)
DNA (699bp) protein (233aa)
CRISPR-associated protein, Cas5 family, Dvulg subtype n=5 Tax=Rhodobacter capsulatus RepID=D5ASG2_RHOCB
Cas5 family CRISPR-associated protein
CRISPR-associated protein {ECO:0000313|EMBL:ETE54110.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus Y262.;"
BSR_Ace_UAPBR_middle_p_200079_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7823..10051)
DNA (2229bp) protein (743aa)
CRISPR-associated helicase, Cas3 family id=2990647 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
CRISPR-associated helicase, Cas3 family
Tax=GWF1_Rhodobacteraceae_65_7_curated
BSR_Ace_UAPBR_middle_p_200079_11
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10168..10686)
DNA (519bp) protein (173aa)
single-stranded DNA-binding protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037BCB23
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
single-stranded DNA-binding protein
BSR_Ace_UAPBR_middle_p_200079_12
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10753..11853)
DNA (1101bp) protein (367aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
3-dehydroquinate synthase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=AROB_PARDP
aroB; 3-dehydroquinate synthase
BSR_Ace_UAPBR_middle_p_200079_13
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11853..12401)
DNA (549bp) protein (183aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
Shikimate kinase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B1J3_PARDP
shikimate kinase
BSR_Ace_UAPBR_middle_p_200079_14
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12617..12847
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YB55_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KGJ16694.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_200079_15
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12834..14453
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B1J1_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ08473.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_200079_16
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14470..15774
DNA (1305bp) protein (435aa)
Tyrosine recombinase XerC n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XYZ9_PARAH
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
tyrosine recombinase XerD
BSR_Ace_UAPBR_middle_p_200079_17
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15940..17961
DNA (2022bp) protein (674aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
transketolase (EC:2.2.1.1)
transketolase n=1 Tax=Paracoccus sp. N5 RepID=UPI00037B6D66
BSR_Ace_UAPBR_middle_p_200079_18
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18638..19507
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037B1BFD
Uncharacterized protein {ECO:0000313|EMBL:KGJ05062.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_200079_19
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19504..20508
DNA (1005bp) protein (335aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B1I4_PARDP
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ABL69378.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
BSR_Ace_UAPBR_middle_p_200079_20
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20621..21130
DNA (510bp) protein (170aa)
acetyl-CoA carboxylase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FA7F
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KGJ15161.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
BSR_Ace_UAPBR_middle_p_200079_21
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21144..22490
DNA (1347bp) protein (449aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KGJ05064.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KGJ05064.1};; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FA7E
acetyl-CoA carboxylase biotin carboxylase subunit
BSR_Ace_UAPBR_middle_p_200079_22
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23119..23640)
DNA (522bp) protein (174aa)
Transferase hexapeptide protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y0A8_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KGJ22357.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
transferase hexapeptide protein
BSR_Ace_UAPBR_middle_p_200079_23
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23637..24266)
DNA (630bp) protein (210aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
guanylate kinase (EC:2.7.4.8)
guanylate kinase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B7A5EE
BSR_Ace_UAPBR_middle_p_200079_24
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24426..25169)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3VZA1_9RHOB
hypothetical protein, transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AII86770.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;"
BSR_Ace_UAPBR_middle_p_200079_25
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25411..26382
DNA (972bp) protein (324aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Paracoccus sp. N5 RepID=UPI000363F1A1
BSR_Ace_UAPBR_middle_p_200079_26
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26524..26973
DNA (450bp) protein (150aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
RNaseH ribonuclease n=1 Tax=Paracoccus sp. N5 RepID=UPI0003722557
rnhA; ribonuclease H
BSR_Ace_UAPBR_middle_p_200079_27
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26973..27620
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B839_PARDP
Membrane protein {ECO:0000313|EMBL:KIX16948.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_200079_28
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27957..29084)
DNA (1128bp) protein (376aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
queuine tRNA-ribosyltransferase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FB2A
tgt; queuine tRNA-ribosyltransferase
BSR_Ace_UAPBR_middle_p_200079_29
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29261..30025)
DNA (765bp) protein (255aa)
Putative hemolysin n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZM8_9RHOB
Ornithine-acyl-ACP acyltransferase {ECO:0000313|EMBL:KGJ13921.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
Putative hemolysin
BSR_Ace_UAPBR_middle_p_200079_30
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30180..30578
DNA (399bp) protein (133aa)
Methionine-R-sulfoxide reductase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B394_PARDP
Methionine sulfoxide reductase B {ECO:0000313|EMBL:KGJ13922.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
methionine-R-sulfoxide reductase
Displaying items 1-30 of 57 in total

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