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BSR_Ace_UAPBR_middle_p_201107

Search features with annotation key words

Displaying items 1-30 of 296 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_201107_1
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(610..1551)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QCL8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EMI04950.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
BSR_Ace_UAPBR_middle_p_201107_2
unknown

Not on your lists

comp(1684..2097)
DNA (414bp) protein (138aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_201107_3
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2101..2382)
DNA (282bp) protein (94aa)
Repressor n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HAB6_RHOCA
Putative transcriptional regulator {ECO:0000313|EMBL:KGM86718.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
phage repressor
BSR_Ace_UAPBR_middle_p_201107_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2787..3047)
DNA (261bp) protein (87aa)
Putative insertion sequence transposase protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q8KLA2_RHIEC
insertion sequence transposase
Putative insertion sequence transposase protein {ECO:0000313|EMBL:AAM54845.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
BSR_Ace_UAPBR_middle_p_201107_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3044..3595)
DNA (552bp) protein (184aa)
transposase n=1 Tax=Paracoccus sp. N5 RepID=UPI000368CFB2
Transposase, Mutator family {ECO:0000313|EMBL:EKY27579.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
putative transposase for insertion sequence NGRIS-34a
BSR_Ace_UAPBR_middle_p_201107_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3535..3963)
DNA (429bp) protein (143aa)
transposase n=1 Tax=Paracoccus sp. N5 RepID=UPI000368CFB2
Transposase {ECO:0000313|EMBL:ESY62348.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
Transposase-like protein
BSR_Ace_UAPBR_middle_p_201107_7
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4411..5739)
DNA (1329bp) protein (443aa)
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BD967
MFS transporter {ECO:0000313|EMBL:KGJ08813.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
sugar (and other) transporter family protein
BSR_Ace_UAPBR_middle_p_201107_8
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5864..7093)
DNA (1230bp) protein (410aa)
Creatininase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EII3_9RHOB
Creatininase {ECO:0000313|EMBL:ESW59967.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
creatinase
BSR_Ace_UAPBR_middle_p_201107_9
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7231..8160
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EG47_9RHOB
LysR family transcriptional regulator {ECO:0000313|EMBL:ESW59968.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
LysR family transcriptional regulator
BSR_Ace_UAPBR_middle_p_201107_10
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8610..10898
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XWA8_PARAH
Membrane protein {ECO:0000313|EMBL:KGJ02056.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_201107_11
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11102..11317)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9K6_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ18573.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_201107_12
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11543..12592)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica SH28 RepID=K5DZ66_RHOBT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII86263.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;"
BSR_Ace_UAPBR_middle_p_201107_13
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12589..13656)
DNA (1068bp) protein (356aa)
Glycosyl transferase group 1 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I885_RHOVT
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADP69710.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
BSR_Ace_UAPBR_middle_p_201107_14
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13653..14501)
DNA (849bp) protein (283aa)
Methyltransferase type 11 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I886_RHOVT
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase {ECO:0000313|EMBL:KAI94079.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
type 11 methyltransferase
BSR_Ace_UAPBR_middle_p_201107_15
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14568..16556)
DNA (1989bp) protein (663aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ADP69698.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ADP69698.1};; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
Asparagine synthetase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I873_RHOVT
BSR_Ace_UAPBR_middle_p_201107_16
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16544..17773)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I874_RHOVT
Glycosyltransferase {ECO:0000313|EMBL:KAI94081.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_201107_17
Thermosynechococcus elongatus, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17770..18861)
DNA (1092bp) protein (364aa)
Tlr0242 protein n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DM81_THEEB
glycosyltransferase
Tlr0242 protein {ECO:0000313|EMBL:BAC07795.1}; TaxID=197221 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus elongatus (strain BP-1).;"
BSR_Ace_UAPBR_middle_p_201107_18
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18944..20068)
DNA (1125bp) protein (375aa)
glycosyl transferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B62828
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EAT04339.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
putative glycosyltransferase
BSR_Ace_UAPBR_middle_p_201107_19
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20079..21854)
DNA (1776bp) protein (592aa)
ABC transporter protein n=3 Tax=Azotobacter vinelandii RepID=C1DM72_AZOVD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL10145.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ABC transporter protein
BSR_Ace_UAPBR_middle_p_201107_20
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21860..23134)
DNA (1275bp) protein (425aa)
Vi polysaccharide biosynthesis protein vipA/tviB n=1 Tax=Henriciella marina RepID=UPI000381B4C2
Polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:EAS51329.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
UDP-glucose/GDP-mannose dehydrogenase family protein
BSR_Ace_UAPBR_middle_p_201107_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23203..24213)
DNA (1011bp) protein (337aa)
lspL2; UDP-glucuronate 5'-epimerase (EC:5.1.3.12)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SGW4_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
BSR_Ace_UAPBR_middle_p_201107_22
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24227..25363)
DNA (1137bp) protein (379aa)
lpcC; lipopolysaccharide core biosynthesis mannosyltransferase LpcC (EC:2.4.-.-)
Lipopolysaccharide core biosynthesis mannosyltransferase LpcC {ECO:0000313|EMBL:AII86278.1}; EC=2.4.-.- {ECO:0000313|EMBL:AII86278.1};; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;"
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA076-C03 RepID=UPI00037F4DE3
BSR_Ace_UAPBR_middle_p_201107_23
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25472..27676)
DNA (2205bp) protein (735aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Tyrosine-protein kinase Wzc n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K5T4_9RHOB
Tyrosine-protein kinase Wzc {ECO:0000313|EMBL:EKX55728.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
BSR_Ace_UAPBR_middle_p_201107_24
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28142..29278)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WZY0_RHOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP72944.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3).;"
BSR_Ace_UAPBR_middle_p_201107_25

Not on your lists

comp(29663..30637)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AFT9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD60587.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Cobalamin synthesis protein, P47K
BSR_Ace_UAPBR_middle_p_201107_26
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30630..30923)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3IVL7_RHOS4
Uncharacterized protein {ECO:0000313|EMBL:KGM35512.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_201107_27
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30976..31878)
DNA (903bp) protein (301aa)
Polysaccharide deacetylase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PQG2_RHOS1
polysaccharide deacetylase
Uncharacterized protein {ECO:0000313|EMBL:KFI30004.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
BSR_Ace_UAPBR_middle_p_201107_28
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31977..33326)
DNA (1350bp) protein (450aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:AKH98762.1}; EC=6.3.5.6 {ECO:0000313|EMBL:AKH98762.1};; EC=6.3.5.7 {ECO:0000313|EMBL:AKH98762.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FVF0_9RHOB
hypothetical protein
BSR_Ace_UAPBR_middle_p_201107_29

Not on your lists

comp(33335..34438)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AWG7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD60788.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ABC transporter, ATP-binding protein
BSR_Ace_UAPBR_middle_p_201107_30

Not on your lists

comp(34506..35729)
DNA (1224bp) protein (408aa)
ABC transporter, substrate binding protein (Spermidine/putrescine) n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FVF2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN56212.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter, substrate-binding protein
Displaying items 1-30 of 296 in total

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