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BSR_Ace_UAPBR_middle_p_130720

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_130720_1
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..140)
DNA (138bp) protein (46aa)
Acetyl-CoA synthetase {ECO:0000313|EMBL:KGJ01474.1}; EC=6.2.1.1 {ECO:0000313|EMBL:KGJ01474.1};; Flags: Fragment;; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Acetyl-coenzyme A synthetase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9T3_PARDP
acetate--CoA ligase
BSR_Ace_UAPBR_middle_p_130720_2
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..1345)
DNA (915bp) protein (305aa)
ApbE family lipoprotein n=2 Tax=Paracoccus denitrificans RepID=A1B9T4_PARDP
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:KGJ09882.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ApbE family lipoprotein
BSR_Ace_UAPBR_middle_p_130720_3
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1342..1917)
DNA (576bp) protein (192aa)
NosL family protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9T5_PARDP
Copper chaperone {ECO:0000313|EMBL:KGJ09881.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
NosL family protein
BSR_Ace_UAPBR_middle_p_130720_4
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1914..2738)
DNA (825bp) protein (275aa)
Nitrous oxide maturation protein NosY n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9T6_PARDP
Membrane protein {ECO:0000313|EMBL:KGJ09880.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
nitrous oxide maturation protein NosY
BSR_Ace_UAPBR_middle_p_130720_5
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2735..3634)
DNA (900bp) protein (300aa)
ABC transporter related protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9T7_PARDP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ09879.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ABC transporter
BSR_Ace_UAPBR_middle_p_130720_6
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3600..4931)
DNA (1332bp) protein (444aa)
Periplasmic copper-binding protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9T8_PARDP
Carbohydrate-binding protein {ECO:0000313|EMBL:KGJ09878.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
periplasmic copper-binding
BSR_Ace_UAPBR_middle_p_130720_7
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4936..6897)
DNA (1962bp) protein (654aa)
Nitrous-oxide reductase {ECO:0000256|HAMAP-Rule:MF_00716}; EC=1.7.2.4 {ECO:0000256|HAMAP-Rule:MF_00716};; N(2)OR {ECO:0000256|HAMAP-Rule:MF_00716}; N2O reductase {ECO:0000256|HAMAP-Rule:MF_00716}; Flags: Precursor;; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
nitrous-oxide reductase (EC:1.7.99.6)
Nitrous-oxide reductase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9T9_PARDP
BSR_Ace_UAPBR_middle_p_130720_8
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6920..9109)
DNA (2190bp) protein (730aa)
FMN-binding domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U0_PARDP
FMN-binding protein {ECO:0000313|EMBL:KGJ09876.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
FMN-binding domain-containing protein
BSR_Ace_UAPBR_middle_p_130720_9
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9106..9516)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U1_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ09875.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_130720_10
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9855..10292
DNA (438bp) protein (146aa)
Pseudoazurin n=1 Tax=Paracoccus pantotrophus RepID=AZUP_PARPN
Pseudoazurin {ECO:0000313|EMBL:KGJ09874.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
pseudoazurin
BSR_Ace_UAPBR_middle_p_130720_11
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10454..10726
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U3_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ09873.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_130720_12
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10771..11436)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U4_PARDP
Regulator of cell morphogenesis and NO signaling {ECO:0000313|EMBL:KGJ09872.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_130720_13
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11429..12022)
DNA (594bp) protein (198aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U5_PARDP
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BSR_Ace_UAPBR_middle_p_130720_14
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12019..13488)
DNA (1470bp) protein (490aa)
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U6_PARDP
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:KGJ09870.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
UbiD family decarboxylase
BSR_Ace_UAPBR_middle_p_130720_15
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13612..14145
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U7_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ09869.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_130720_16
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14142..15137
DNA (996bp) protein (332aa)
Peptidase U32 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U8_PARDP
Protease {ECO:0000313|EMBL:KGJ09868.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
peptidase U32
BSR_Ace_UAPBR_middle_p_130720_17
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15140..16030
DNA (891bp) protein (297aa)
Peptidase U32 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9U9_PARDP
Protease {ECO:0000313|EMBL:KGJ09867.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
peptidase U32
BSR_Ace_UAPBR_middle_p_130720_18
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16055..17269
DNA (1215bp) protein (405aa)
NnrS family protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9V0_PARDP
Short-chain dehydrogenase {ECO:0000313|EMBL:KGJ09866.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
NnrS family protein
BSR_Ace_UAPBR_middle_p_130720_19
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17355..17867)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9V1_PARDP
3-dehydroquinate dehydratase {ECO:0000313|EMBL:KGJ09865.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_130720_20
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17867..18670)
DNA (804bp) protein (268aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9V2_PARDP
PpiC-type peptidyl-prolyl cis-trans isomerase
BSR_Ace_UAPBR_middle_p_130720_21
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18677..19378)
DNA (702bp) protein (234aa)
NarI protein n=1 Tax=Paracoccus denitrificans RepID=Q56357_PARDE
Nitrate reductase {ECO:0000313|EMBL:KGJ09863.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
respiratory nitrate reductase subunit gamma
BSR_Ace_UAPBR_middle_p_130720_22
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19389..20078)
DNA (690bp) protein (230aa)
Respiratory nitrate reductase chaperone NarJ n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9V4_PARDP
Nitrate reductase {ECO:0000313|EMBL:KGJ09862.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
nitrate reductase molybdenum cofactor assembly chaperone
BSR_Ace_UAPBR_middle_p_130720_23
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20075..21592)
DNA (1518bp) protein (506aa)
Respiratory nitrate reductase beta subunit n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9V5_PARDP
Nitrate reductase {ECO:0000313|EMBL:KGJ09861.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
nitrate reductase subunit beta
BSR_Ace_UAPBR_middle_p_130720_24
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21589..25353)
DNA (3765bp) protein (1255aa)
Respiratory nitrate reductase alpha subunit apoprotein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9V6_PARDP
Nitrate reductase {ECO:0000313|EMBL:KGJ09860.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
nitrate reductase subunit alpha
BSR_Ace_UAPBR_middle_p_130720_25
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25368..28085)
DNA (2718bp) protein (906aa)
NarK n=1 Tax=Paracoccus pantotrophus RepID=Q93PW1_PARPN
MFS transporter {ECO:0000313|EMBL:KGJ09859.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
nitrite transporter
BSR_Ace_UAPBR_middle_p_130720_26
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28359..29063
DNA (705bp) protein (235aa)
Transcriptional activator NarR n=1 Tax=Paracoccus pantotrophus RepID=Q93PW2_PARPN
Transcriptional regulator {ECO:0000313|EMBL:KGJ09858.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ftrB; transcriptional activator FtrB
BSR_Ace_UAPBR_middle_p_130720_27
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29287..30477)
DNA (1191bp) protein (397aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9W1_PARDP
Major facilitator transporter {ECO:0000313|EMBL:KGJ09857.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Bcr/CflA subfamily drug resistance transporter
BSR_Ace_UAPBR_middle_p_130720_28
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30847..31560
DNA (714bp) protein (238aa)
GntR family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F814
GntR family transcriptional regulator {ECO:0000313|EMBL:KGJ09856.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
GntR family transcriptional regulator
BSR_Ace_UAPBR_middle_p_130720_29
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31588..32730
DNA (1143bp) protein (381aa)
Asparaginase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B9W4_PARDP
Asparaginase {ECO:0000313|EMBL:KGJ09855.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
asparaginase/glutaminase
BSR_Ace_UAPBR_middle_p_130720_trna_1
unknown

Not on your lists

comp(32938..33011)
DNA (74bp)
transferRNA Arg
Displaying items 1-30 of 42 in total

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