ggKbase home page

BSR_Ace_UAPBR_middle_p_33242

Search features with annotation key words

Displaying items 1-30 of 369 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_33242_1
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..220)
DNA (219bp) protein (73aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B3Z8_PARDP
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABL70242.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
BSR_Ace_UAPBR_middle_p_33242_2
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292..1374)
DNA (1083bp) protein (361aa)
Polyamine ABC trasnporter, periplasmic polyamine-binding protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B3Z9_PARDP
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGJ11740.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
polyamine ABC transporter periplasmic substrate-binding protein
BSR_Ace_UAPBR_middle_p_33242_3
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1477..2556)
DNA (1080bp) protein (360aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B400_PARDP
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGJ11741.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
extracellular solute-binding protein
BSR_Ace_UAPBR_middle_p_33242_4
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2589..3692)
DNA (1104bp) protein (368aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B401_PARDP
spermidine/putrescine ABC transporter ATPase
BSR_Ace_UAPBR_middle_p_33242_5
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3873..5099)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000374B44E
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KGJ11743.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
FAD dependent oxidoreductase
BSR_Ace_UAPBR_middle_p_33242_6
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5096..5662)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B402_PARDP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL70246.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
BSR_Ace_UAPBR_middle_p_33242_7
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5756..6481)
DNA (726bp) protein (242aa)
short-chain dehydrogenase n=1 Tax=Paracoccus sp. N5 RepID=UPI000360ACC8
Short-chain dehydrogenase {ECO:0000313|EMBL:KGJ11744.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
short chain dehydrogenase
BSR_Ace_UAPBR_middle_p_33242_8
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6523..8145)
DNA (1623bp) protein (541aa)
FGGY-family pentulose kinase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B404_PARDP
Ribulokinase {ECO:0000313|EMBL:KGJ11745.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
FGGY-family pentulose kinase
BSR_Ace_UAPBR_middle_p_33242_9
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8174..8905)
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B405_PARDP
Glucose dehydrogenase {ECO:0000313|EMBL:KGJ11746.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
short-chain dehydrogenase/reductase SDR
BSR_Ace_UAPBR_middle_p_33242_10
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8942..9919)
DNA (978bp) protein (326aa)
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B406_PARDP
Ribose ABC transporter permease {ECO:0000313|EMBL:KGJ11747.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
inner-membrane translocator
BSR_Ace_UAPBR_middle_p_33242_11
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9909..11408)
DNA (1500bp) protein (500aa)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B407_PARDP
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:KGJ11748.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ABC transporter
BSR_Ace_UAPBR_middle_p_33242_12
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11479..12384)
DNA (906bp) protein (302aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B408_PARDP
LacI family transcriptional regulator {ECO:0000313|EMBL:KGJ11749.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
periplasmic binding protein/LacI transcriptional regulator
BSR_Ace_UAPBR_middle_p_33242_13
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12484..13368)
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B409_PARDP
AraC family transcriptional regulator {ECO:0000313|EMBL:KGJ11750.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
helix-turn-helix domain-containing protein
BSR_Ace_UAPBR_middle_p_33242_14
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13619..15076)
DNA (1458bp) protein (486aa)
Xylulokinase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B410_PARDP
Xylulose kinase {ECO:0000313|EMBL:KGJ11751.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
xylulokinase
BSR_Ace_UAPBR_middle_p_33242_15
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15082..16119)
DNA (1038bp) protein (346aa)
sulfurtransferase n=1 Tax=Paracoccus sp. N5 RepID=UPI00036B7952
Sulfurtransferase {ECO:0000313|EMBL:KGJ11752.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
alcohol dehydrogenase
BSR_Ace_UAPBR_middle_p_33242_16
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16329..16793)
DNA (465bp) protein (155aa)
GatB/Yqey domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B412_PARDP
Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KGJ11753.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
GatB/Yqey domain-containing protein
BSR_Ace_UAPBR_middle_p_33242_17
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16962..18110
DNA (1149bp) protein (383aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B413_PARDP
carbamoyl phosphate synthase small subunit
BSR_Ace_UAPBR_middle_p_33242_18
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18200..20278
DNA (2079bp) protein (693aa)
General secretory system II, protein E domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B414_PARDP
Glycosyl transferase {ECO:0000313|EMBL:KGJ11755.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
general secretion pathway protein E
BSR_Ace_UAPBR_middle_p_33242_19
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21332..24133)
DNA (2802bp) protein (934aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
(Glutamate--ammonia-ligase) adenylyltransferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B415_PARDP
(glutamate--ammonia-ligase) adenylyltransferase
BSR_Ace_UAPBR_middle_p_33242_20
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24365..25210
DNA (846bp) protein (282aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Putative arginyl-tRNA--protein transferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=ATE_PARDP
arginyl-tRNA-protein transferase
BSR_Ace_UAPBR_middle_p_33242_21
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25376..27130
DNA (1755bp) protein (585aa)
Acetolactate synthase, large subunit n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B417_PARDP
Acetolactate synthase {ECO:0000313|EMBL:KGJ11758.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
acetolactate synthase 3 catalytic subunit
BSR_Ace_UAPBR_middle_p_33242_22
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27146..27706
DNA (561bp) protein (187aa)
Acetolactate synthase, small subunit n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B418_PARDP
Acetolactate synthase {ECO:0000313|EMBL:KGJ11759.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ilvH; acetolactate synthase 3 regulatory subunit
BSR_Ace_UAPBR_middle_p_33242_23
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27711..28052)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B419_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ11760.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_33242_24
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28292..29044)
DNA (753bp) protein (251aa)
Peptidase M48, Ste24p n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B420_PARDP
Peptidase M48 {ECO:0000313|EMBL:KGJ11761.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
peptidase M48, Ste24p
BSR_Ace_UAPBR_middle_p_33242_25
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29172..29423
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B421_PARDP
Phosphomannomutase {ECO:0000313|EMBL:KGJ11762.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_33242_26
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29437..29685)
DNA (249bp) protein (83aa)
UPF0235 protein Pden_2174 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=Y2174_PARDP
UPF0235 protein IT40_04900 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_33242_27
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29791..30357
DNA (567bp) protein (189aa)
Nitroreductase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B423_PARDP
Nitroreductase {ECO:0000313|EMBL:KGJ11764.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
nitroreductase
BSR_Ace_UAPBR_middle_p_33242_28
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30357..31058
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B424_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ11765.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_33242_29
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31024..31284)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B425_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ11766.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_33242_30
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31284..31688)
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase n=1 Tax=Paracoccus sp. N5 RepID=UPI000361EFF5
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KGJ11767.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
glyoxalase/bleomycin resistance protein/dioxygenase
Displaying items 1-30 of 369 in total

View Taxonomy