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BSR_Ace_UAPBR_middle_p_49675

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_49675_1
unknown

Not on your lists

166..798
DNA (633bp) protein (211aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_49675_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(822..3986)
DNA (3165bp) protein (1055aa)
Periplasmic protease n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZM8_9BACT
TolB protein precursor
TolB protein {ECO:0000313|EMBL:AIE88139.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
BSR_Ace_UAPBR_middle_p_49675_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4118..4642)
DNA (525bp) protein (175aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHC2_9BACT
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEF60757.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
BSR_Ace_UAPBR_middle_p_49675_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4666..5880
DNA (1215bp) protein (405aa)
Oxidoreductase domain-containing protein n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9T988_PAEAL
Oxidoreductase {ECO:0000313|EMBL:KIC94975.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
oxidoreductase domain protein
BSR_Ace_UAPBR_middle_p_49675_5
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5909..7828
DNA (1920bp) protein (640aa)
Fucose permease n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WXJ9_9BACT
Fucose permease {ECO:0000313|EMBL:EPR68673.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
L-fucose transporter
BSR_Ace_UAPBR_middle_p_49675_6
unknown

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7785..7955
DNA (171bp) protein (57aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_49675_7
Wolinella succinogenes, Wolinella, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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7993..11148
DNA (3156bp) protein (1052aa)
HYBRID HISTIDINE KINASE n=1 Tax=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) RepID=Q7M9E9_WOLSU
cheA; hybrid histidine kinase
HYBRID HISTIDINE KINASE {ECO:0000313|EMBL:CAE10078.1}; TaxID=273121 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Wolinella.;" source="Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC; 11488 / FDC 602W) (Vibrio succinogenes).;"
BSR_Ace_UAPBR_middle_p_49675_8
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11145..12368
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VWV8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC98949.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_49675_9
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12392..14575
DNA (2184bp) protein (728aa)
Fibronectin type III domain protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R331_ISOPI
fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ADV62550.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
BSR_Ace_UAPBR_middle_p_49675_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14673..16208)
DNA (1536bp) protein (512aa)
Outer membrane efflux protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCA7_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:EEF62575.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
transporter
BSR_Ace_UAPBR_middle_p_49675_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16488..17495
DNA (1008bp) protein (336aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR33_9BACT
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
magnesium and cobalt transport protein CorA
BSR_Ace_UAPBR_middle_p_49675_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17492..18847
DNA (1356bp) protein (452aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR32_9BACT
histidine kinase
BSR_Ace_UAPBR_middle_p_49675_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18857..20281
DNA (1425bp) protein (475aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XR31_9BACT
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EEF57727.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
atoC; DNA-binding response regulator, NtrC family (contains REC, AAA-type ATPase, and DNA-binding Fis domains)
BSR_Ace_UAPBR_middle_p_49675_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20288..22090
DNA (1803bp) protein (601aa)
hypothetical protein n=2 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI0003624171
Uncharacterized protein {ECO:0000313|EMBL:EEF57726.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
BSR_Ace_UAPBR_middle_p_49675_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22221..23615
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035FEA69
Uncharacterized protein {ECO:0000313|EMBL:EEF57308.1}; Flags: Precursor; Fragment;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
BSR_Ace_UAPBR_middle_p_49675_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23699..26038
DNA (2340bp) protein (780aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:EEF59878.1}; EC=2.7.10.2 {ECO:0000313|EMBL:EEF59878.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
exopolysaccharide tyrosine-protein kinase (EC:2.7.10.2)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035F423E
BSR_Ace_UAPBR_middle_p_49675_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

26048..26686
DNA (639bp) protein (213aa)
Polysaccharide export protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK54_9BACT
Polysaccharide export protein {ECO:0000313|EMBL:EEF59877.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
polysaccharide export protein
BSR_Ace_UAPBR_middle_p_49675_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

26730..27125
DNA (396bp) protein (132aa)
FHA domain containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK53_9BACT
FHA domain containing protein {ECO:0000313|EMBL:EEF59876.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_49675_19
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

27174..27989
DNA (816bp) protein (272aa)
TatD-related deoxyribonuclease id=4491790 bin=GWF2_Planctomycetes_50_10 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
TatD family hydrolase
Tax=GWF2_Planctomycetes_50_10_curated
BSR_Ace_UAPBR_middle_p_49675_20
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

Not on your lists

27986..28759
DNA (774bp) protein (258aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis id=4138062 bin=GWA2_Elusi_like_61_42 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
Tax=GWA2_Elusimicrobia_61_42_curated
BSR_Ace_UAPBR_middle_p_49675_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28748..29509)
DNA (762bp) protein (254aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein n=1 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00036E114B
dinuclear metal center protein
BSR_Ace_UAPBR_middle_p_49675_22
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

29600..30364
DNA (765bp) protein (255aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase family protein (EC:2.3.1.51)
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase family protein {ECO:0000313|EMBL:ACO31669.1}; EC=2.3.1.51 {ECO:0000313|EMBL:ACO31669.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6F8_ACIC5
BSR_Ace_UAPBR_middle_p_49675_23
unknown

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comp(30458..31267)
DNA (810bp) protein (270aa)
WGS project CAEQ00000000 data, annotated contig 2171 (Fragment) n=1 Tax=Trypanosoma congolense (strain IL3000) RepID=F9WC16_TRYCI
BSR_Ace_UAPBR_middle_p_49675_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(31375..33273)
DNA (1899bp) protein (633aa)
O-antigen polymerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBG9_9BACT
O-antigen polymerase {ECO:0000313|EMBL:EEF62854.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
related to polysaccharide transport proteins
BSR_Ace_UAPBR_middle_p_49675_25
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

33339..33854
DNA (516bp) protein (172aa)
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=2 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DYC1_METI4
folK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase {ECO:0000313|EMBL:ACD82398.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
BSR_Ace_UAPBR_middle_p_49675_26
unknown

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comp(34282..34782)
DNA (501bp) protein (167aa)

This feature has no annotations

Displaying 26 items

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