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BSR_Ace_UAPBR_middle_p_112674

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_112674_1
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(352..2313)
DNA (1962bp) protein (654aa)
Peptidase M48 Ste24p n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPD1_OPITP
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ACB73536.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
BSR_Ace_UAPBR_middle_p_112674_2
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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2700..3809
DNA (1110bp) protein (370aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis id=4446200 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
glutamine--scyllo-inositol transaminase
Tax=GWF2_Lentisphaerae_49_21_curated
BSR_Ace_UAPBR_middle_p_112674_3
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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3819..4544
DNA (726bp) protein (242aa)
Glycosyl transferase family 2 id=4417042 bin=GWF2_Lentisphaerae_52_8 species=Methylophaga lonarensis genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
family 2 glycosyl transferase
Tax=GWF2_Lentisphaerae_52_8_curated
BSR_Ace_UAPBR_middle_p_112674_4
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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4674..5267
DNA (594bp) protein (198aa)
Putative membrane protein id=4577538 bin=GWF2_Lentisphaerae_49_21 species=Methylophaga lonarensis genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
BSR_Ace_UAPBR_middle_p_112674_5
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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5248..6321
DNA (1074bp) protein (358aa)
Putative dehydrogenase id=4577542 bin=GWF2_Lentisphaerae_49_21 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
lipopolysaccharide biosynthesis protein
Tax=GWF2_Lentisphaerae_49_21_curated
BSR_Ace_UAPBR_middle_p_112674_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6608..6976
DNA (369bp) protein (123aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGM0_9BACT
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:EEF61071.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
sigma 54 modulation protein/ribosomal protein S30EA
BSR_Ace_UAPBR_middle_p_112674_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7059..7994)
DNA (936bp) protein (312aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDL4_9BACT
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:EEF62160.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Uracil-DNA glycosylase
BSR_Ace_UAPBR_middle_p_112674_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8004..9026)
DNA (1023bp) protein (341aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSP1_9BACT
PpiC-type peptidyl-prolyl cis-trans isomerase
BSR_Ace_UAPBR_middle_p_112674_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9033..10625)
DNA (1593bp) protein (531aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSP2_9BACT
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EEF57161.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
3-phosphoglycerate dehydrogenase
BSR_Ace_UAPBR_middle_p_112674_10
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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10871..13168
DNA (2298bp) protein (766aa)
Tetratricopeptide TPR_2 repeat protein id=2231274 bin=GWB2_Ignavibacteria_35_12 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
BSR_Ace_UAPBR_middle_p_112674_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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13235..15274
DNA (2040bp) protein (680aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein n=2 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00035E05F2
hflB; ATP-dependent Zn protease FtsH
BSR_Ace_UAPBR_middle_p_112674_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15324..16556
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL89_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59440.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_112674_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16568..17167
DNA (600bp) protein (200aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLI6_9BACT
crossover junction endodeoxyribonuclease RuvC
BSR_Ace_UAPBR_middle_p_112674_14
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17192..17752)
DNA (561bp) protein (187aa)
hypothetical protein n=3 Tax=cellular organisms RepID=UPI00037A9013
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH75099.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_Ace_UAPBR_middle_p_112674_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17752..18939)
DNA (1188bp) protein (396aa)
chromosome segregation protein SMC n=1 Tax=Halomonas stevensii RepID=UPI0002D65ED4
Chromosome segregation protein SMC {ECO:0000313|EMBL:ETW93243.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SMC domain-containing protein
BSR_Ace_UAPBR_middle_p_112674_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19157..21964
DNA (2808bp) protein (936aa)
Putative oligopeptide transporter, OPT family {ECO:0000313|EMBL:CDM64513.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
OPT family oligopeptide transporter id=24544002 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide transporter, OPT family
BSR_Ace_UAPBR_middle_p_112674_17
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21997..22848
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000366414E
tRNA/rRNA methyltransferase (SpoU)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AFM11768.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;"
BSR_Ace_UAPBR_middle_p_112674_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

24655..25641
DNA (987bp) protein (329aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Malate dehydrogenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ90_9BACT
malate dehydrogenase
BSR_Ace_UAPBR_middle_p_112674_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(25723..26751)
DNA (1029bp) protein (343aa)
Tyrosine recombinase XerC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL74_9BACT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tyrosine recombinase XerC
BSR_Ace_UAPBR_middle_p_112674_20
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(26847..28151)
DNA (1305bp) protein (435aa)
Oxidoreductase domain protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R4M4_PIRSD
oxidoreductase domain-containing protein
Tax=CG_Arma_01
BSR_Ace_UAPBR_middle_p_112674_21
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

28947..29579
DNA (633bp) protein (211aa)
Phosphate transport regulator related to PhoU n=2 Tax=unclassified Opitutaceae RepID=I6AXI6_9BACT
phosphate transport regulator
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
BSR_Ace_UAPBR_middle_p_112674_22
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

29644..30711
DNA (1068bp) protein (356aa)
inorganic phosphate transporter n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017448A0
inorganic phosphate transporter
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
BSR_Ace_UAPBR_middle_p_112674_23
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

31053..32144
DNA (1092bp) protein (364aa)
Phosphate transporter n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY87_9BACT
inorganic phosphate transporter
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
BSR_Ace_UAPBR_middle_p_112674_24
unknown

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32314..33156
DNA (843bp) protein (281aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_112674_25
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

33409..34719
DNA (1311bp) protein (437aa)
Methylmalonyl-CoA decarboxylase beta subunit id=3069893 bin=GWC1_Spirochaetes_27_15 species=Kineosphaera limosa genus=Kineosphaera taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
sodium ion-translocating decarboxylase subunit beta
Tax=GWD1_Spirochaetes_27_9_curated
BSR_Ace_UAPBR_middle_p_112674_26
unknown

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34757..35032
DNA (276bp) protein (92aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_112674_27
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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35029..36861
DNA (1833bp) protein (611aa)
Pyruvate carboxylase id=3069895 bin=GWC1_Spirochaetes_27_15 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
biotin/lipoyl attachment domain-containing protein
Tax=GWD1_Spirochaetes_27_9_curated
BSR_Ace_UAPBR_middle_p_112674_28

Not on your lists

36986..37762
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EBL4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE03349.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
birA, biotin-(acetyl-CoA-carboxylase) ligase
Displaying 28 items

View Taxonomy