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BSR_Ace_UAPBR_middle_p_3218

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_3218_1
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

2..289
DNA (288bp) protein (96aa)
Integrase catalytic region n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZV9_9GAMM
putative transposase
Tax=GWC2_Nitrospirae_57_9_curated
BSR_Ace_UAPBR_middle_p_3218_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(474..1754)
DNA (1281bp) protein (427aa)
Oxidoreductase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT44_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF56992.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase domain-containing protein
BSR_Ace_UAPBR_middle_p_3218_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1963..2715
DNA (753bp) protein (251aa)
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTT1_9BACT
Polysaccharide deacetylase {ECO:0000313|EMBL:EDY21969.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cda1; polysaccharide deacetylase family protein
BSR_Ace_UAPBR_middle_p_3218_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2754..3884)
DNA (1131bp) protein (377aa)
Protein RecA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF42_9BACT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
recA; protein recA
BSR_Ace_UAPBR_middle_p_3218_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4047..4328
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61144.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_3218_6

Not on your lists

4489..6051
DNA (1563bp) protein (521aa)
NADH:ubiquinone oxidoreductase, membrane subunit N {ECO:0000313|EMBL:CBI08470.1}; EC=1.6.99.5 {ECO:0000313|EMBL:CBI08470.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NADH:ubiquinone oxidoreductase, membrane subunit N n=1 Tax=mine drainage metagenome RepID=E6QMJ9_9ZZZZ
NADH dehydrogenase I subunit N
BSR_Ace_UAPBR_middle_p_3218_7
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6070..6840
DNA (771bp) protein (257aa)
Putative metal-dependent hydrolase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XTH6_9FIRM
Putative metal-dependent hydrolase {ECO:0000313|EMBL:EHQ88575.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_3218_8
Waddlia chondrophila, Waddlia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

7007..8104
DNA (1098bp) protein (366aa)
wbpE; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC:2.6.1.-)
Putative UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:ADI39162.1}; EC=2.6.1.- {ECO:0000313|EMBL:ADI39162.1};; TaxID=716544 species="Bacteria; Chlamydiae; Chlamydiales; Waddliaceae; Waddlia.;" source="Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044).;"
hypothetical protein n=2 Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI0003760546
BSR_Ace_UAPBR_middle_p_3218_9
unknown

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8101..9615
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00036291C7
BSR_Ace_UAPBR_middle_p_3218_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9593..11278)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP68_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58319.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_3218_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11394..12641)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFW7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61129.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
BSR_Ace_UAPBR_middle_p_3218_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12814..14832
DNA (2019bp) protein (673aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFW6_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF61128.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_3218_13
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

15162..15407
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BGD8_CHLPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL65465.1}; TaxID=290317 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
BSR_Ace_UAPBR_middle_p_3218_14
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

15411..17471
DNA (2061bp) protein (687aa)
CRISPR-associated helicase Cas3 n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KDB9_CHLTE
ATP-dependent RNA helicase SrmB
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:AAM72368.1}; TaxID=194439 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 /; TLS).;"
BSR_Ace_UAPBR_middle_p_3218_15
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

17487..18197
DNA (711bp) protein (237aa)
CRISPR-associated Cas5 family protein id=24608578 bin=RAAC11 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RAAC11 organism_group=Unknown_CP
CRISPR-associated Csd1 family protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
BSR_Ace_UAPBR_middle_p_3218_16
Chlorobium phaeovibrioides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

18194..19960
DNA (1767bp) protein (589aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SFQ5_PROVI
CRISPR-associated RAMP Csd1 family protein
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:ABP37314.1}; TaxID=290318 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Prosthecochloris vibrioformis (strain DSM 265) (Chlorobium vibrioforme; subsp. thiosulfatophilum (strain DSM 265)) (Chlorobium phaeovibrioides; (strain DSM 265)).;"
BSR_Ace_UAPBR_middle_p_3218_17
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19987..20859
DNA (873bp) protein (291aa)
CRISPR-associated protein, Csd2 family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NKD7_DESSD
CRISPR-associated protein, Csd2 family
CRISPR-associated protein cas7/csd2, subtype I-c/dvulg {ECO:0000313|EMBL:KKB49038.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
BSR_Ace_UAPBR_middle_p_3218_18
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20867..21610
DNA (744bp) protein (248aa)
CRISPR-associated RecB family exonuclease Cas4b n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FJ82_9GAMM
CRISPR-associated RecB family exonuclease Cas4b {ECO:0000313|EMBL:EGW53123.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
exonuclease N
BSR_Ace_UAPBR_middle_p_3218_19
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21607..22641
DNA (1035bp) protein (345aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RB03_DESPD
Cas1 family CRISPR-associated protein
BSR_Ace_UAPBR_middle_p_3218_20
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

22643..22936
DNA (294bp) protein (98aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000255|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01471};; TaxID=194439 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 /; TLS).;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=CAS2_CHLTE
hypothetical protein
BSR_Ace_UAPBR_middle_p_3218_21
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24257..24508)
DNA (252bp) protein (84aa)
Uncharacterized {ECO:0000313|EMBL:CFX74670.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
Displaying 21 items

View Taxonomy