ggKbase home page

BSR_Lac_UAPBR_effluent_at_88371

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_effluent_at_88371_1
unknown

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)

This feature has no annotations

BSR_Lac_UAPBR_effluent_at_88371_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(1420..2517)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D1B4_HALOH
hypothetical protein
Tax=RBG_19FT_COMBO_JS1_35_14_curated
BSR_Lac_UAPBR_effluent_at_88371_3
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2554..3315)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000376A4AC
Uncharacterized protein {ECO:0000313|EMBL:CCU79918.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
hypothetical protein
BSR_Lac_UAPBR_effluent_at_88371_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(3345..4598)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003617FD3
lipoprotein release ABC transporter permease
Tax=RBG_19FT_COMBO_JS1_35_14_curated
BSR_Lac_UAPBR_effluent_at_88371_5
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4610..5845)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00036D4728
hypothetical protein
Tax=RBG_13_Actinobacteria_35_12_curated
BSR_Lac_UAPBR_effluent_at_88371_6
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(5847..6536)
DNA (690bp) protein (230aa)
ABC transporter n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00036A5CF3
antimicrobial peptide ABC transporter ATPase
Tax=CG_OP9-01
BSR_Lac_UAPBR_effluent_at_88371_7
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6576..7160)
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family n=5 Tax=Pelosinus fermentans RepID=I8RLN0_9FIRM
Regulatory protein TetR {ECO:0000313|EMBL:EIW19775.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
regulatory protein TetR
BSR_Lac_UAPBR_effluent_at_88371_8
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7513..8589
DNA (1077bp) protein (359aa)
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L155_OSCVS
BSR_Lac_UAPBR_effluent_at_88371_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8863..9630
DNA (768bp) protein (256aa)
Methyltransferase type 11 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LXE9_TEPAE
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:AKB80785.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
ubiquinone/menaquinone biosynthesis methyltransferase
BSR_Lac_UAPBR_effluent_at_88371_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

9800..10084
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035CDD70
Tax=RBG_19FT_COMBO_JS1_35_14_curated
BSR_Lac_UAPBR_effluent_at_88371_11
unknown

Not on your lists

10202..10429
DNA (228bp) protein (76aa)

This feature has no annotations

BSR_Lac_UAPBR_effluent_at_88371_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(10434..11366)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035F7BD1
pseudouridine-5'-phosphate glycosidase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
BSR_Lac_UAPBR_effluent_at_88371_13
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11366..12334)
DNA (969bp) protein (323aa)
Transcriptional regulator, MarR family n=4 Tax=Thermoanaerobacter RepID=D3T6J5_THEIA
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADD01608.1}; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter italicus (strain DSM 9252 / Ab9).;"
BSR_Lac_UAPBR_effluent_at_88371_14
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12426..13112)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0B9_9BACT
hypothetical protein
Tax=RBG_13_Actinobacteria_35_12_curated
BSR_Lac_UAPBR_effluent_at_88371_15
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13306..14061)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QV36_SPHPG
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AEV29272.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_effluent_at_88371_16
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(14070..15608)
DNA (1539bp) protein (513aa)
Putative uncharacterized protein id=4687848 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_Lac_UAPBR_effluent_at_88371_17
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(15637..16122)
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=4687849 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_effluent_at_88371_18
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(16211..17266)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein id=4687850 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_Lac_UAPBR_effluent_at_88371_19
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17380..18273)
DNA (894bp) protein (298aa)
tartronate semialdehyde reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PYG5_9BACT
Tax=RBG_13_Actinobacteria_35_12_curated
BSR_Lac_UAPBR_effluent_at_88371_20

Not on your lists

comp(18336..19262)
DNA (927bp) protein (309aa)
putative transketolase C-terminal section (EC:2.2.1.1)
Marine sediment metagenome DNA, contig: S03H2_S11017 {ECO:0000313|EMBL:GAH74295.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transketolase, alpha subunit id=4687843 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
BSR_Lac_UAPBR_effluent_at_88371_21
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19280..20101)
DNA (822bp) protein (274aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase subunit A {ECO:0000313|EMBL:AEE95688.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AEE95688.1};; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Transketolase subunit A n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYU3_MAHA5
BSR_Lac_UAPBR_effluent_at_88371_22
bacterium UASB270, Bacteria

Not on your lists

comp(20802..21491)
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYU1_MAHA5
GntR domain protein {ECO:0000313|EMBL:GAK60841.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
GntR family transcriptional regulator
BSR_Lac_UAPBR_effluent_at_88371_23
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

22014..23057
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037D2B67
asparaginase/glutaminase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
BSR_Lac_UAPBR_effluent_at_88371_24
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

23091..23771
DNA (681bp) protein (227aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00038274E5
Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
BSR_Lac_UAPBR_effluent_at_88371_25
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23819..25186)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000380D770
NAD(FAD)-dependent dehydrogenase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ELY72975.1}; NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:AFZ71795.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 /; SP2).;"
BSR_Lac_UAPBR_effluent_at_88371_26
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(25549..26283)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003791556
metal-dependent hydrolase
Tax=CG_OP9-01
BSR_Lac_UAPBR_effluent_at_88371_27

Not on your lists

comp(26318..26974)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003764CBF
Marine sediment metagenome DNA, contig: S03H2_C02309 {ECO:0000313|EMBL:GAH26561.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
3D domain-containing protein
BSR_Lac_UAPBR_effluent_at_88371_28

Not on your lists

comp(26974..27474)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000369263E
Marine sediment metagenome DNA, contig: S06H3_C01239 {ECO:0000313|EMBL:GAH93742.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
methylated-DNA--protein-cysteine methyltransferase
Displaying 28 items

View Taxonomy