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BSR_Lac_UAPBR_inlet_at_18382

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_18382_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..938)
DNA (936bp) protein (312aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
nuoD; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=NUOD_RHOCS
BSR_Lac_UAPBR_inlet_at_18382_2
unknown

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comp(935..1078)
DNA (144bp) protein (48aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_18382_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1078..1671)
DNA (594bp) protein (198aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
nuoC; NADH dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISX9_RHOCS
BSR_Lac_UAPBR_inlet_at_18382_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1668..2216)
DNA (549bp) protein (183aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
NADH-quinone oxidoreductase subunit B n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NWK6_AZOS1
nuoB; NADH dehydrogenase I subunit B
BSR_Lac_UAPBR_inlet_at_18382_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2207..2575)
DNA (369bp) protein (123aa)
nuoA; NADH-quinone oxidoreductase chain A (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISY1_RHOCS
BSR_Lac_UAPBR_inlet_at_18382_6
unknown

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comp(2719..3312)
DNA (594bp) protein (198aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_18382_trna_5
unknown

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comp(3751..3824)
DNA (74bp)
transferRNA Asp
BSR_Lac_UAPBR_inlet_at_18382_7
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3933..5246)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI000319403C
MFS transporter {ECO:0000313|EMBL:KFD41558.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
major facilitator transporter
BSR_Lac_UAPBR_inlet_at_18382_8
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(5454..7568)
DNA (2115bp) protein (705aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00035D0F1F
PAS domain S-box
Tax=RBG_16_Chloroflexi_60_22_curated
BSR_Lac_UAPBR_inlet_at_18382_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7836..8891
DNA (1056bp) protein (352aa)
Asparagine--tRNA ligase {ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|SAAS:SAAS00089453};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
asparagine--tRNA ligase (EC:6.1.1.22)
Asparagine ligase A n=1 Tax=Providencia burhodogranariea DSM 19968 RepID=K8W640_9ENTR
BSR_Lac_UAPBR_inlet_at_18382_10
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8922..9809
DNA (888bp) protein (296aa)
Malonyl-[acyl-carrier protein] O-methyltransferase n=2 Tax=Halomonas RepID=L9U6Y9_9GAMM
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:ETT32724.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
biotin biosynthesis protein BioC
BSR_Lac_UAPBR_inlet_at_18382_11
unknown

Not on your lists

9855..11138
DNA (1284bp) protein (428aa)
BSR_Lac_UAPBR_inlet_at_18382_12
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

11156..12223
DNA (1068bp) protein (356aa)
Muramoyltetrapeptide carboxypeptidase n=1 Tax=uncultured bacterium A1Q1_fos_485 RepID=L7W071_9BACT
peptidase S66
Tax=BJP_IG2069_Anaerolineales_43_63
BSR_Lac_UAPBR_inlet_at_18382_13
Streptomyces sp. JCM 9888, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12356..13660
DNA (1305bp) protein (435aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1570103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. JCM 9888.;"
Alanine--tRNA ligase n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0RRW9_9DELT
alaS; alanyl-tRNA synthetase
BSR_Lac_UAPBR_inlet_at_18382_trna_4
unknown

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comp(13681..13752)
DNA (72bp)
transferRNA Val
BSR_Lac_UAPBR_inlet_at_18382_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13858..14160)
DNA (303bp) protein (101aa)
DNA-binding protein HupA n=1 Tax=Oceanibaculum indicum P24 RepID=K2J414_9PROT
Sphingomonas taxi strain 30a NODE_82, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28174.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
nucleoid DNA-binding protein
BSR_Lac_UAPBR_inlet_at_18382_15
Rickettsiales bacterium SCGC AAA041-L04, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14335..15279)
DNA (945bp) protein (315aa)
Putative glycosyltransferase EpsH {ECO:0000313|EMBL:KKB96256.1}; EC=2.4.-.- {ECO:0000313|EMBL:KKB96256.1};; TaxID=1607817 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium SCGC AAA041-L04.;"
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036880E0
family 2 glycosyl transferase
BSR_Lac_UAPBR_inlet_at_18382_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15276..17696)
DNA (2421bp) protein (807aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Lon protease n=1 Tax=Azospirillum brasilense RepID=B5AP04_AZOBR
lon; ATP-dependent protease Lon
BSR_Lac_UAPBR_inlet_at_18382_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17838..19094)
DNA (1257bp) protein (419aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKT9_AZOBR
clpX; ATP-dependent Clp protease ATP-binding subunit
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
BSR_Lac_UAPBR_inlet_at_18382_18
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19155..19805)
DNA (651bp) protein (217aa)
clpP; ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Micavibrio aeruginosavorus RepID=G2KM06_MICAA
BSR_Lac_UAPBR_inlet_at_18382_19
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20047..21375)
DNA (1329bp) protein (443aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Trigger factor n=1 Tax=Acetobacter sp. CAG:977 RepID=R5PXZ6_9PROT
tig; trigger factor
BSR_Lac_UAPBR_inlet_at_18382_trna_3
unknown

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comp(21500..21581)
DNA (82bp)
transferRNA Leu
BSR_Lac_UAPBR_inlet_at_18382_20
unknown

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comp(21654..21902)
DNA (249bp) protein (83aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_18382_21
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21976..23487)
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=1 Tax=Azospirillum brasilense RepID=B5ANZ9_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJB96981.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
carbohydrate kinase
BSR_Lac_UAPBR_inlet_at_18382_22
unknown

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comp(23447..24352)
DNA (906bp) protein (302aa)
hypothetical protein
BSR_Lac_UAPBR_inlet_at_18382_trna_2
unknown

Not on your lists

comp(24461..24533)
DNA (73bp)
transferRNA His
BSR_Lac_UAPBR_inlet_at_18382_23
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24742..26151
DNA (1410bp) protein (470aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356, ECO:0000313|EMBL:CCC97842.1}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356, ECO:0000313|EMBL:CCC97842.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Glutamine synthetase n=2 Tax=Azospirillum brasilense RepID=G8AKT0_AZOBR
glnA; glutamine synthetase
BSR_Lac_UAPBR_inlet_at_18382_24
unknown

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comp(26205..26681)
DNA (477bp) protein (159aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_18382_25
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27044..28807)
DNA (1764bp) protein (588aa)
recJ; ssDNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ, putative {ECO:0000313|EMBL:ACI98708.1}; EC=3.1.-.- {ECO:0000313|EMBL:ACI98708.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Single-stranded-DNA-specific exonuclease RecJ, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMP2_RHOCS
BSR_Lac_UAPBR_inlet_at_18382_26
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28807..29781)
DNA (975bp) protein (325aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMP3_RHOCS
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Displaying items 1-30 of 114 in total

View Taxonomy