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BSR_Lac_UAPBR_inlet_at_112000

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_112000_trna_1
unknown

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comp(277..350)
DNA (74bp)
transferRNA Arg
BSR_Lac_UAPBR_inlet_at_112000_1
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(492..1280)
DNA (789bp) protein (263aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ICG8_BEII9
enoyl-(acyl carrier protein) reductase
BSR_Lac_UAPBR_inlet_at_112000_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1383..2396)
DNA (1014bp) protein (338aa)
Putative flagellar motor protein MotB-like n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANL7_AZOBR
putative flagellar motor protein MotB-like
Putative flagellar motor protein MotB-like {ECO:0000313|EMBL:CCD00840.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
BSR_Lac_UAPBR_inlet_at_112000_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2405..3280)
DNA (876bp) protein (292aa)
Chemotaxis protein motA (Motility protein A) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z793_AZOL4
Flagellar motor protein MotA {ECO:0000313|EMBL:EWY38908.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
motA3; Chemotaxis protein motA (Motility protein A)
BSR_Lac_UAPBR_inlet_at_112000_4
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3328..3855)
DNA (528bp) protein (176aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDZ6_9RHOB
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EDZ46997.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
arsenate reductase
BSR_Lac_UAPBR_inlet_at_112000_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4348..4782
DNA (435bp) protein (145aa)
Translation initiation factor IF-3 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IV68_RHOCS
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
BSR_Lac_UAPBR_inlet_at_112000_6
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4918..5928)
DNA (1011bp) protein (337aa)
kamA; L-lysine 2,3-aminomutase (EC:5.4.3.2)
KamA family protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HKB4_9BRAD
KamA family protein {ECO:0000313|EMBL:ERF85258.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
BSR_Lac_UAPBR_inlet_at_112000_7
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6038..7621)
DNA (1584bp) protein (528aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2N2_9PROT
purH; bifunctional IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
BSR_Lac_UAPBR_inlet_at_112000_8
unknown

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7802..9316
DNA (1515bp) protein (505aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_112000_9
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9327..10346)
DNA (1020bp) protein (340aa)
Enoyl-[acyl-carrier-protein] reductase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HXJ7_9PROT
Enoyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EKV32916.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
Putative 2-nitropropane dioxygenase family protein
BSR_Lac_UAPBR_inlet_at_112000_10
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10418..11659)
DNA (1242bp) protein (414aa)
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Aspartokinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUT9_RHOCS
BSR_Lac_UAPBR_inlet_at_112000_11
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11700..12476
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036B1D9D
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
3-demethylubiquinone-9 3-methyltransferase
BSR_Lac_UAPBR_inlet_at_112000_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12542..12835
DNA (294bp) protein (98aa)
50S ribosomal protein L28 n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DC82AB
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
rpmB; 50S ribosomal protein L28
BSR_Lac_UAPBR_inlet_at_112000_13
unknown

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13085..13369
DNA (285bp) protein (95aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_112000_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13477..14391)
DNA (915bp) protein (305aa)
calcium-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035F8082
Putative signal transduction protein with EFhand domain {ECO:0000313|EMBL:ACS59459.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
symbiosis-related calsymin
BSR_Lac_UAPBR_inlet_at_112000_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14545..15168
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI0003816202
putative RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CDK97322.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
BSR_Lac_UAPBR_inlet_at_112000_16
unknown

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15165..15512
DNA (348bp) protein (116aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_112000_17
unknown

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15517..16068
DNA (552bp) protein (184aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_112000_18
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16101..16766
DNA (666bp) protein (222aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Cytidylate kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPE0_PARL1
cytidylate kinase
BSR_Lac_UAPBR_inlet_at_112000_19
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16968..18719
DNA (1752bp) protein (584aa)
30S ribosomal protein S1 n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYN4_9PROT
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
rpsA; 30S ribosomal protein S1
BSR_Lac_UAPBR_inlet_at_112000_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19162..19491)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AN19_MARMM
Uncharacterized protein {ECO:0000313|EMBL:KKB09977.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_112000_21
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19499..21205)
DNA (1707bp) protein (569aa)
parC; DNA topoisomerase IV, subunit A (EC:5.99.1.-)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
DNA topoisomerase 4 subunit A n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX51_PARL1
Displaying 22 items

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