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BSR_Lac_UAPBR_inlet_at_53738

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_53738_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..483)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VCL6_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42721.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
BSR_Lac_UAPBR_inlet_at_53738_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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777..1529
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJ51_9PROT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
rpsB; 30S ribosomal protein S2
BSR_Lac_UAPBR_inlet_at_53738_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1677..2603
DNA (927bp) protein (309aa)
Elongation factor Ts n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z648_AZOL4
elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
BSR_Lac_UAPBR_inlet_at_53738_4
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

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comp(2712..4184)
DNA (1473bp) protein (491aa)
Putative uncharacterized protein id=1918577 bin=GWD2_Clostridiales_32_59 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
regulator of chromosome condensation RCC1
Tax=GWD2_Clostridiales_32_59_curated
BSR_Lac_UAPBR_inlet_at_53738_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4462..5211
DNA (750bp) protein (250aa)
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Uridylate kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISU9_RHOCS
BSR_Lac_UAPBR_inlet_at_53738_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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5347..5895
DNA (549bp) protein (183aa)
Ribosome-recycling factor n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUK4_9PROT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
frr; ribosome recycling factor frr
BSR_Lac_UAPBR_inlet_at_53738_7
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5906..6391
DNA (486bp) protein (162aa)
CMP deaminase n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003670C39
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:ABD56663.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
BSR_Lac_UAPBR_inlet_at_53738_8
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6543..7250
DNA (708bp) protein (236aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
Isoprenyl transferase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AE43_9PROT
undecaprenyl pyrophosphate synthase
BSR_Lac_UAPBR_inlet_at_53738_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7228..8121
DNA (894bp) protein (298aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037E27BD
BSR_Lac_UAPBR_inlet_at_53738_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8127..9341
DNA (1215bp) protein (405aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY3_AZOBR
1-deoxy-D-xylulose 5-phosphate reductoisomerase
BSR_Lac_UAPBR_inlet_at_53738_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9353..10501
DNA (1149bp) protein (383aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
membrane-associated zinc metalloprotease (EC:3.4.24.-)
Membrane-associated zinc metalloprotease, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISU4_RHOCS
BSR_Lac_UAPBR_inlet_at_53738_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10502..12910
DNA (2409bp) protein (803aa)
Outer membrane protein assembly factor BamA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY5_AZOBR
outer membrane protein
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
BSR_Lac_UAPBR_inlet_at_53738_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12910..13527
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY6_AZOBR
Membrane protein {ECO:0000313|EMBL:KJB97026.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
exported protein of unknown function; putative OmpH domain
BSR_Lac_UAPBR_inlet_at_53738_14
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13633..14118
DNA (486bp) protein (162aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SM98_RHOPH
BSR_Lac_UAPBR_inlet_at_53738_15
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14108..14905
DNA (798bp) protein (266aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4M3_AZOL4
lpxA; UDP-N-acetylglucosamine acyltransferase
BSR_Lac_UAPBR_inlet_at_53738_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14902..15723
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY9_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB11977.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
BSR_Lac_UAPBR_inlet_at_53738_17
unknown

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16090..16620
DNA (531bp) protein (177aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_53738_18
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16675..19023
DNA (2349bp) protein (783aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=LPXB_RHOCS
BSR_Lac_UAPBR_inlet_at_53738_19
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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19020..19994
DNA (975bp) protein (325aa)
ADP-heptose--LPS heptosyltransferase (EC:2.-.-.-)
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:ABI61226.1}; EC=2.-.-.- {ECO:0000313|EMBL:ABI61226.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
ADP-heptose--LPS heptosyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVC6_GRABC
BSR_Lac_UAPBR_inlet_at_53738_20
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20009..20881)
DNA (873bp) protein (291aa)
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NY65_AZOS1
BSR_Lac_UAPBR_inlet_at_53738_21
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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20987..21511
DNA (525bp) protein (175aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
Endoribonuclease (EC:3.1.-.-)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003186549
BSR_Lac_UAPBR_inlet_at_53738_22
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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21508..22389
DNA (882bp) protein (294aa)
Putative divalent cation transporter (Hemolysin and CBS domains) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AG02_AZOBR
hemolysin C
Hemolysin C {ECO:0000313|EMBL:AIB13153.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
BSR_Lac_UAPBR_inlet_at_53738_23
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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22622..23944
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000378021A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB10733.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
BSR_Lac_UAPBR_inlet_at_53738_24
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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24165..24596
DNA (432bp) protein (144aa)
Methyl-accepting chemotaxis protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9S0_PHAFV
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EPY00818.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
Methyl-accepting chemotaxis protein
BSR_Lac_UAPBR_inlet_at_53738_25
GWA2_OD1_47_10, Parcubacteria, Bacteria

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24640..24732
DNA (93bp) protein (31aa)
IS1016 transposase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AEE9
IS1016 transposase {ECO:0000313|EMBL:KKU50552.1}; TaxID=1618839 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10.;"
Displaying 25 items

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