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BSR_Lac_C_na_47154

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_C_na_47154_1
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(340..1209)
-----------------
DNA (870bp)
protein (290aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JN51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY54164.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
BSR_Lac_C_na_47154_2
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1521..2555
-----------------
DNA (1035bp)
protein (345aa)
Transcriptional regulator n=1 Tax=Clostridium termitidis CT1112 RepID=S0FGC1_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EMS70022.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
LacI family transcriptional regulator
BSR_Lac_C_na_47154_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2918..4333
-----------------
DNA (1416bp)
protein (472aa)
Vancomycin resistance protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHU8_9FIRM
Vancomycin resistance protein {ECO:0000313|EMBL:CDE51349.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
VanW family protein
BSR_Lac_C_na_47154_4
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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4696..5442
-----------------
DNA (747bp)
protein (249aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N4P7_9FIRM
membrane protein
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_C_na_47154_5
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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5439..6110
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9NDD4_9FIRM
membrane protein
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_C_na_47154_6
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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6138..7589
-----------------
DNA (1452bp)
protein (484aa)
Peptidase, M20E (Gly-X carboxypeptidase) subfamily n=1 Tax=Clostridium sp. D5 RepID=F0YX56_9CLOT
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_C_na_47154_7
unknown

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7816..7938
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

BSR_Lac_C_na_47154_8
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8014..9681
-----------------
DNA (1668bp)
protein (556aa)
ilvB1; acetolactate synthase large subunit IlvB (EC:2.2.1.6)
Acetolactate synthase large subunit biosynthetic type n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MJS7_9FIRM
Acetolactate synthase large subunit biosynthetic type {ECO:0000313|EMBL:CDF00880.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
BSR_Lac_C_na_47154_9
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9686..10198
-----------------
DNA (513bp)
protein (171aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MKJ7_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CDF00881.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
BSR_Lac_C_na_47154_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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10203..11210
-----------------
DNA (1008bp)
protein (336aa)
ilvC; Ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase id=3475263 bin=GWF2_Clostridiales_38_85 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
BSR_Lac_C_na_47154_11
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11207..12856
-----------------
DNA (1650bp)
protein (550aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
dihydroxy-acid dehydratase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FAFE
dihydroxy-acid dehydratase
BSR_Lac_C_na_47154_12
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12871..14376
-----------------
DNA (1506bp)
protein (502aa)
leuA3; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
2-isopropylmalate synthase id=3475259 bin=GWF2_Clostridiales_38_85 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
BSR_Lac_C_na_47154_13
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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14610..16190
-----------------
DNA (1581bp)
protein (527aa)
2-isopropylmalate synthase LeuA id=3475253 bin=GWF2_Clostridiales_38_85 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
2-isopropylmalate synthase
Tax=GWF2_Clostridiales_38_85_curated
BSR_Lac_C_na_47154_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

16181..17446
-----------------
DNA (1266bp)
protein (422aa)
3-isopropylmalate dehydratase, large subunit id=3475249 bin=GWF2_Clostridiales_38_85 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
3-isopropylmalate dehydratase large subunit
Tax=GWF2_Clostridiales_38_85_curated
BSR_Lac_C_na_47154_15
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17516..18001
-----------------
DNA (486bp)
protein (162aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3710A
3-isopropylmalate dehydratase small subunit
BSR_Lac_C_na_47154_16
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

17998..19065
-----------------
DNA (1068bp)
protein (356aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C3710E
Tax=GWF2_Clostridiales_38_85_curated
BSR_Lac_C_na_47154_17
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19455..19646)
-----------------
DNA (192bp)
protein (64aa)
xylan 1,4-beta-xylosidase n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B71A57
hypothetical protein
Tax=BJP_IG2157_Clostridiales_52_13
BSR_Lac_C_na_47154_18
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19943..20419
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JJ42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34138.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
rhodanese domain-containing protein
BSR_Lac_C_na_47154_19
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

20664..21893
-----------------
DNA (1230bp)
protein (410aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CFS6_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDA64087.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
BSR_Lac_C_na_47154_20
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21956..22915
-----------------
DNA (960bp)
protein (320aa)
Glycosyltransferase group 2 family protein n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FWF7_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDB13371.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
family 2 glycosyl transferase
BSR_Lac_C_na_47154_21
Clostridium sp. CAG:451, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23246..25411
-----------------
DNA (2166bp)
protein (722aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:451 RepID=R7KEJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE74128.1}; TaxID=1262809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:451.;"
putative membrane protein
BSR_Lac_C_na_47154_22
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

25934..26992
-----------------
DNA (1059bp)
protein (353aa)
Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CU42_METMJ
hypothetical protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
BSR_Lac_C_na_47154_23
unknown

Not on your lists

26992..29226
-----------------
DNA (2235bp)
protein (745aa)

This feature has no annotations

BSR_Lac_C_na_47154_24
unknown

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29491..30579
-----------------
DNA (1089bp)
protein (363aa)

This feature has no annotations

BSR_Lac_C_na_47154_25
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30852..31583
-----------------
DNA (732bp)
protein (244aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM8_9CLOT
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:EEG31146.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
MerR family transcriptional regulator
BSR_Lac_C_na_47154_26
Thermoactinomyces vulgaris, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31955..33703)
-----------------
DNA (1749bp)
protein (583aa)
Neopullulanase 2; EC=3.2.1.135;; Alpha-amylase II; TVA II; TaxID=2026 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces vulgaris.;"
Neopullulanase 2 n=2 Tax=Thermoactinomyces vulgaris RepID=NEPU2_THEVU
alpha amylase catalytic subunit
BSR_Lac_C_na_47154_27
Geobacillus sp. WCH70, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33796..34824)
-----------------
DNA (1029bp)
protein (343aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACS23591.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACS23591.1};; TaxID=471223 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain WCH70).;"
Transcriptional regulator, LacI family n=1 Tax=Geobacillus sp. (strain WCH70) RepID=C5D6S4_GEOSW
Displaying 27 items

View Taxonomy