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RifSed_csp2_16ft_3_scaffold_12175

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_12175_1
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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190..1137
DNA (948bp) protein (316aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3END3_CHLPB
Uncharacterized protein {ECO:0000313|EMBL:KKH46860.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_12175_2
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1163..1402
DNA (240bp) protein (80aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3END3_CHLPB
Uncharacterized protein {ECO:0000313|EMBL:KKH46860.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_12175_3
unknown

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1392..1550
DNA (159bp) protein (53aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_12175_4
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1582..4191
DNA (2610bp) protein (870aa)
TIGR02687 family protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY20_METHD
TIGR02687 family protein
TIGR02687 family protein {ECO:0000313|EMBL:AGB49595.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_12175_5
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4241..6280
DNA (2040bp) protein (680aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MA01_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV22367.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
RifSed_csp2_16ft_3_scaffold_12175_6
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

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6335..6718
DNA (384bp) protein (128aa)
ATP-dependent DNA helicase pcrA (EC:3.6.1.-)
UvrD/REP helicase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6Q7_METEZ
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_12175_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6800..7720
DNA (921bp) protein (307aa)
DNA polymerase beta domain protein region Tax=Clostridium sp. CAG:265 RepID=R6LLT4_9CLOT
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_12175_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7701..8114
DNA (414bp) protein (138aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_12175_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8230..8442
DNA (213bp) protein (71aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_12175_10
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8498..8662
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CZR0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA71645.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
RifSed_csp2_16ft_3_scaffold_12175_11
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

8677..9066
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1J8Y9_9ARCH
hypothetical protein
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_12175_12
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

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comp(9096..9260)
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNR8_METZD
hypothetical protein
Tax=RBG_16_OP11_Levybacteria_35_11_curated
RifSed_csp2_16ft_3_scaffold_12175_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(9559..9909)
DNA (351bp) protein (117aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_12175_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10016..10531
DNA (516bp) protein (172aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_12175_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10531..10767
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 15 items

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