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RifSed_csp2_16ft_3_scaffold_3697

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_3697_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(77..292)
DNA (216bp) protein (72aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JD98_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72987.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_3697_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

400..1800
DNA (1401bp) protein (467aa)
Replication factor C large subunit Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKL7_METZD
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256|HAMAP-Rule:MF_01508}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AAA ATPase
RifSed_csp2_16ft_3_scaffold_3697_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2180..2443
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=Q05DW3_AERPE
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:KCZ70915.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3697_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2436..2759
DNA (324bp) protein (108aa)
PilT protein domain protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRF8_ARCVS
twitching motility protein PilT
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_3697_5
unknown

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2931..3299
DNA (369bp) protein (123aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3697_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3313..3660
DNA (348bp) protein (116aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_3697_7
GWB1_OP11_49_7, Gottesmanbacteria, Microgenomates, Bacteria

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3872..5188
DNA (1317bp) protein (439aa)
Transposase Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7J8F7_METBM
Transposase {ECO:0000313|EMBL:KKW12576.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWB1_49_7.;"
transposase
RifSed_csp2_16ft_3_scaffold_3697_8
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5119..5352)
DNA (234bp) protein (78aa)
Tax=RBG_13_Deltaproteobacteria_52_11_curated
RifSed_csp2_16ft_3_scaffold_3697_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5349..6341)
DNA (993bp) protein (331aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein Taw2 {ECO:0000256|HAMAP-Rule:MF_01922}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methyltransferase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469W6_METBF
tRNA methylase Trm12p Wyeosine biosynthesis
RifSed_csp2_16ft_3_scaffold_3697_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6338..7336)
DNA (999bp) protein (333aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:KCZ72332.1}; EC=1.1.1.3 {ECO:0000313|EMBL:KCZ72332.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8W7_METEZ
RifSed_csp2_16ft_3_scaffold_3697_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7333..7845)
DNA (513bp) protein (171aa)
ACT-domain-containing protein predicted allosteric regulator of homoserine dehydrogenase Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA94_METMS
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:KCZ72333.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ACT-domain-containing protein predicted allosteric regulator of homoserine dehydrogenase
RifSed_csp2_16ft_3_scaffold_3697_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(7891..8373)
DNA (483bp) protein (161aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3697_13
unknown

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comp(8690..8962)
DNA (273bp) protein (91aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3697_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9023..9316)
DNA (294bp) protein (98aa)
Regulatory protein ArsR Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D594_METSW
PAS domain S-box {ECO:0000313|EMBL:KCZ72090.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
regulatory protein ArsR
RifSed_csp2_16ft_3_scaffold_3697_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9388..9999)
DNA (612bp) protein (204aa)
Metallo cofactor biosynthesis protein Tax=Methanosarcina mazei RepID=Q8PU73_METMA
Radical SAM protein, TatD family-associated {ECO:0000313|EMBL:KCZ71564.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
radical SAM domain protein
RifSed_csp2_16ft_3_scaffold_3697_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10044..10883)
DNA (840bp) protein (280aa)
Methionine aminopeptidase {ECO:0000256|RuleBase:RU003653}; EC=3.4.11.18 {ECO:0000256|RuleBase:RU003653};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methionine aminopeptidase Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNT5_9EURY
methionine aminopeptidase, type II
RifSed_csp2_16ft_3_scaffold_3697_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(10876..11730)
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Methanosarcina mazei Tuc01 RepID=M1QLS7_METMZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3697_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11730..12473)
DNA (744bp) protein (248aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:KCZ71561.1}; EC=1.97.1.4 {ECO:0000313|EMBL:KCZ71561.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Anaerobic ribonucleoside-triphosphate reductase activating protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ08_METZD
anaerobic ribonucleoside-triphosphate reductase activating protein
RifSed_csp2_16ft_3_scaffold_3697_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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12582..12899
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPB5_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3697_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12972..14597
DNA (1626bp) protein (542aa)
UPI0003D1B034 related cluster Tax=unknown RepID=UPI0003D1B034
2-polyprenylphenol 6-hydroxylase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3697_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14598..15176)
DNA (579bp) protein (193aa)
AsnC/Lrp family transcriptional regulator Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YW62_METPS
Transcriptional regulator {ECO:0000313|EMBL:KCZ70364.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AsnC/Lrp family transcriptional regulator
RifSed_csp2_16ft_3_scaffold_3697_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15302..16000
DNA (699bp) protein (233aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYR3_THEOJ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70363.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4Fe-4S ferredoxin
RifSed_csp2_16ft_3_scaffold_3697_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16005..16277
DNA (273bp) protein (91aa)
Uncharacterized conserved protein UCP006577 Tax=Methanofollis liminatans DSM 4140 RepID=J1L3Y8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ70362.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3697_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16280..17560)
DNA (1281bp) protein (427aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphomethylpyrimidine synthase Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C003_METCG
thiC; thiamine biosynthesis protein ThiC
RifSed_csp2_16ft_3_scaffold_3697_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17992..18153
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71641.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
seg bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RifSed_csp2_16ft_3_scaffold_3697_26
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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18414..18746
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HH70_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB03365.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
RifSed_csp2_16ft_3_scaffold_3697_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19007..19255
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHV0_METPE
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_3697_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19252..19479
DNA (228bp) protein (76aa)
Toxin-antitoxin system, toxin component, HicA family Tax=delta proteobacterium NaphS2 RepID=D8FBP3_9DELT
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:KCZ71864.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
toxin, HicA family
RifSed_csp2_16ft_3_scaffold_3697_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(19765..20166)
DNA (402bp) protein (134aa)
Thiol disulfide interchange protein Tax=Brachyspira pilosicoli WesB RepID=K0JK17_BRAPL
dsbD; thiol disulfide interchange protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3697_30
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21044..21499
DNA (456bp) protein (152aa)
DNA polymerase beta domain protein region Tax=Methanotorris formicicus Mc-S-70 RepID=H1KX82_9EURY
putative nucleotidyltransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying items 1-30 of 32 in total

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