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RifSed_csp2_16ft_3_scaffold_19421

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_19421_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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81..2084
DNA (2004bp) protein (668aa)
DNA mismatch repair protein MutL Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VD0_METBU
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA mismatch repair protein MutL
RifSed_csp2_16ft_3_scaffold_19421_trna_1
unknown

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comp(243..314)
DNA (72bp)
transferRNA Thr
RifSed_csp2_16ft_3_scaffold_19421_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2092..3066
DNA (975bp) protein (325aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative cobalt-precorrin-6A synthase [deacetylating] Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L211_METHD
cobalamin biosynthesis protein CbiD
RifSed_csp2_16ft_3_scaffold_19421_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3063..3638
DNA (576bp) protein (192aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:KCZ73371.1}; EC=2.1.1.132 {ECO:0000313|EMBL:KCZ73371.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYD0_METHD
precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
RifSed_csp2_16ft_3_scaffold_19421_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3635..4207)
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73488.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_19421_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4226..4423)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73487.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_19421_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4504..5331)
DNA (828bp) protein (276aa)
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:KCZ72976.1}; EC=2.8.1.1 {ECO:0000313|EMBL:KCZ72976.1};; EC=2.8.1.2 {ECO:0000313|EMBL:KCZ72976.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Rhodanese-related sulfurtransferase-like protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMX7_9BACT
Rhodanese-related sulfurtransferase-like protein
RifSed_csp2_16ft_3_scaffold_19421_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5554..6993
DNA (1440bp) protein (480aa)
Uncharacterized protein Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PX12_METMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ73393.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_19421_8
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7458..7691
DNA (234bp) protein (78aa)
Putative uncharacterized protein Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R816_AMMDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX52445.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
RifSed_csp2_16ft_3_scaffold_19421_9

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7681..8070
DNA (390bp) protein (130aa)
Ribonuclease VapC Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R815_AMMDK
Marine sediment metagenome DNA, contig: S03H2_L04150 {ECO:0000313|EMBL:GAH34045.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PilT protein domain-containing protein
Displaying 10 items

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