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RifSed_csp2_16ft_3_scaffold_10699

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_10699_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(313..1134)
DNA (822bp) protein (274aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70403.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_10699_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1473..2087)
DNA (615bp) protein (205aa)
ABC transporter Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PVL5_CLOSD
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:KCZ72997.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
yknY; ABC transporter
RifSed_csp2_16ft_3_scaffold_10699_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2125..3294)
DNA (1170bp) protein (390aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XI3_METBU
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:KCZ72998.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_10699_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3299..4504)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XI4_METBU
Uncharacterized protein {ECO:0000313|EMBL:KCZ72999.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative carboxyl-terminal-processing protease, deltaproteobacterial
RifSed_csp2_16ft_3_scaffold_10699_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4514..4966)
DNA (453bp) protein (151aa)
Predicted redox-active protein (CxxC motif) Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W459_UNCMA
redox-active protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_10699_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5017..5406)
DNA (390bp) protein (130aa)
Copper binding protein, plastocyanin/azurin family Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TR27_METAC
Uncharacterized protein {ECO:0000313|EMBL:KCZ73463.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
plastocyanin/azurin family copper binding protein
RifSed_csp2_16ft_3_scaffold_10699_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5403..6233)
DNA (831bp) protein (277aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VWE9_DESAS
hypothetical protein
RifSed_csp2_16ft_3_scaffold_10699_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(6282..7748)
DNA (1467bp) protein (489aa)
tRNA-splicing ligase RtcB Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D26_METBF
RNA-2',3'-PO4:RNA-5'-OH ligase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_10699_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7809..8357
DNA (549bp) protein (183aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA Tax=planctomycete KSU-1 RepID=I3IIY6_9PLAN
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_10699_10
unknown

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comp(8358..8801)
DNA (444bp) protein (148aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_10699_11
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9009..9338)
DNA (330bp) protein (110aa)
Beta-lactamase domain protein Tax=Methanofollis liminatans DSM 4140 RepID=J0S8Q7_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:EJG06984.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminatans DSM 4140.;"
beta-lactamase domain-containing protein
RifSed_csp2_16ft_3_scaffold_10699_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9658..11235
DNA (1578bp) protein (526aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CTP synthase (EC:6.3.4.2)
CTP synthase Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7E3_METMS
Displaying 12 items

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