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RifSed_csp2_16ft_3_scaffold_1325

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_1325_1
unknown

Not on your lists

comp(323..535)
DNA (213bp) protein (71aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_1325_2
unknown

Not on your lists

comp(715..1317)
DNA (603bp) protein (201aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_1325_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2007..2285)
DNA (279bp) protein (93aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1325_4
unknown

Not on your lists

2402..2590
DNA (189bp) protein (63aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_1325_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2616..2903)
DNA (288bp) protein (96aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1325_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2932..3687)
DNA (756bp) protein (252aa)
ABC transporter related protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNW5_METZD
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1325_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3675..4481)
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Acinetobacter sp. NIPH 2100 RepID=N9QAW5_9GAMM
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1325_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4481..5581)
DNA (1101bp) protein (367aa)
Nitrate ABC transporter, ATP-binding protein, putative Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29615_ARCFU
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1325_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5704..6222
DNA (519bp) protein (173aa)
Transcriptional regulator, XRE family Tax=Methanolobus psychrophilus R15 RepID=K4MGL6_9EURY
transcriptional regulator, XRE family
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_1325_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6225..6800
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W701_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1325_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6832..7074
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1325_12
unknown

Not on your lists

comp(7091..7252)
DNA (162bp) protein (54aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_1325_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7292..8296)
DNA (1005bp) protein (335aa)
Pyruvate-formate lyase-activating enzyme {ECO:0000313|EMBL:KCZ73678.1}; EC=1.97.1.4 {ECO:0000313|EMBL:KCZ73678.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Pyruvate-formate lyase-activating enzyme Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVF5_METHD
pyruvate-formate lyase-activating enzyme
RifSed_csp2_16ft_3_scaffold_1325_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8293..10554)
DNA (2262bp) protein (754aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPU1_METAC
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:KCZ73677.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1325_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10670..11827)
DNA (1158bp) protein (386aa)
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:KCZ72444.1}; EC=2.3.3.- {ECO:0000313|EMBL:KCZ72444.1};; EC=2.3.3.14 {ECO:0000313|EMBL:KCZ72444.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
2-isopropylmalate synthase Tax=Methanolobus psychrophilus R15 RepID=K4MGD8_9EURY
2-isopropylmalate synthase
RifSed_csp2_16ft_3_scaffold_1325_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11971..13215
DNA (1245bp) protein (415aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable methanogen homoaconitase large subunit Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=HACA_METAC
Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 (large subunit)
RifSed_csp2_16ft_3_scaffold_1325_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13219..15498)
DNA (2280bp) protein (760aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8I8_METCZ
RifSed_csp2_16ft_3_scaffold_1325_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15488..15964)
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4A0_UNCMA
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ71227.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1325_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(16037..16585)
DNA (549bp) protein (183aa)
Flagella protein Tax=Methanolobus psychrophilus R15 RepID=K4MF48_9EURY
flagella protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1325_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(16643..17710)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein bin=GWB2_Desulfobacterales_56_26 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
mreB; putative rod shape-determining protein MreB
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1325_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

17816..18202
DNA (387bp) protein (129aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1325_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18294..18965
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I460_METCZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ71522.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1325_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18943..19809
DNA (867bp) protein (289aa)
30S ribosomal protein S6 modification protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5G4_UNCMA
Glutathione synthase/ribosomal protein S6 modification enzyme (Glutaminyl transferase) {ECO:0000313|EMBL:KCZ71521.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rimK; 30S ribosomal protein S6 modification protein
RifSed_csp2_16ft_3_scaffold_1325_24
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19810..20934)
DNA (1125bp) protein (375aa)
Glutamate--cysteine ligase, GCS2 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8T0_METB6
glutamate--cysteine ligase
Tax=BJP_IG2102_Methanoregula_52_95
RifSed_csp2_16ft_3_scaffold_1325_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20986..21393)
DNA (408bp) protein (136aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos37D1 RepID=Q648J5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ71519.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1325_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

21546..21827
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7C7_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_1325_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21824..22405)
DNA (582bp) protein (194aa)
Putative methylase Tax=Methanolobus psychrophilus R15 RepID=K4MIE4_9EURY
HemK-related putative methylase {ECO:0000313|EMBL:KCZ73535.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative methylase
RifSed_csp2_16ft_3_scaffold_1325_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22427..23530)
DNA (1104bp) protein (368aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:KCZ73534.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Hypothetical conserved protein bin=GWC2_Proteo_65_14_Ab886 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
RifSed_csp2_16ft_3_scaffold_1325_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23540..24514)
DNA (975bp) protein (325aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5STY2_9BACT
Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit {ECO:0000313|EMBL:KCZ73533.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_1325_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24642..25841)
DNA (1200bp) protein (400aa)
Polysulphide reductase NrfD Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3I4_FERPA
Polysulfide reductase {ECO:0000313|EMBL:KCZ73532.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
polysulfide reductase NrfD
Displaying items 1-30 of 59 in total

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