ggKbase home page

RifSed_csp2_16ft_3_scaffold_3215_11

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(8985..10277)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 426.0
  • Bit_score: 713
  • Evalue 1.00e-202
Diaminopimelate decarboxylase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAT6_METEZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 426.0
  • Bit_score: 588
  • Evalue 4.70e-165
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 426.0
  • Bit_score: 588
  • Evalue 1.30e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1293
ATGTGCTGCGTTATGTTCATGATAAAAGATCATCTCGAGATCAGGAACAACCATCTTATAATCGGAAGTGCAGACACCGCAGAACTTGCAGAGCAGTATGGAACACCGCTGTACGTTACGAACGAGTCACGCGTCATCGAGAACTTCTCTGCATACAGAGAAGCATTTCCAGAGGCTGACATCTATTATGCTGCCAAAGCCAACGCCAGCTTCGCAATCCTCAGGATGCTTTCAAGAGAAGGGGCAGGCGCTGATGTCTTCAGTTACGGGGAACTGTATATGGCGCTGCTTGCGGGGATACCAAGGAAGAAGATCCTGTTCAACGGGAACTCAAAGACAGATTTCGAGCTTGAGAAAGCGGTCGAGCTCGGGATCAGAGTTTCTGTAGACTCGCAGGACGAACTTCATGCTCTGTCCAAGATTGCAGATAAATCAGGAAAAGCCGCTGAAATCGCCTTTCGAGTCAATCCAGATGTCTCTCCAAAGACTCATCCCAAGATCTCAACAGGGCTGCGCACCTCCAAGTTCGGGATACCCTCTGAGGAAGTTGTCAGCATCTACCGCGAAGCATCGGAGCTGCCTGGCATCTCTCCGTGCGGGATACACTGCCATATCGGTTCCCAGATACTTGATACCTCGCCCTTCAAAGAGACCGTGCAGAAGATGATGGATCTTGTTGAGAAAGTGGTGGAGATCGGAATACACCTTGAATTCGTTGACATGGGCTCAGGTCTCGGAATTCCATACAAGAAAGGAGAACCTGCCCCAACGCCGCAGGATCATGCGGATGCCATCCTTCCTTTATTTAAGGAAAGAACGGAAGCTTTAGGGATCTCACCTGTGCTCATCCTGGAGCCAGGACGTTATATCGTGGCTGATACCACGATCCTGCTCACGCGTGTGAATACAGTGAAGAAGGCTGTAAAGAACTTTGTGGGTGTGGACGCTGGCTTTAATCTTCTCATCCGCCCTGCGATGTACGATTCTTACCACCATGTTGTTGTTGCGAATAAGGCTTCATCTCCTCCGGAGGACATATATACCATCGCCGGACCGATATGCGAGACCGGGGATATTCTCGCAAAGGACAGGGAGCTTCCTCGTGTGGAAAAAGGTGATCTCATAGCCCTGCTGGATGCAGGCGCTTACGGTTTCAGCATGAGCAGTCAGTACAATGGGAGGCCGAGATGCGCCGAGGTCCTGGTGAAAAACGGTGCCTCTGATCTCATAAGAAGCCGCGAGGATGTGGAAGATCTGCTTGCAAAGCAGAGGCTTCCTGCAAGGTTGATGTAG
PROTEIN sequence
Length: 431
MCCVMFMIKDHLEIRNNHLIIGSADTAELAEQYGTPLYVTNESRVIENFSAYREAFPEADIYYAAKANASFAILRMLSREGAGADVFSYGELYMALLAGIPRKKILFNGNSKTDFELEKAVELGIRVSVDSQDELHALSKIADKSGKAAEIAFRVNPDVSPKTHPKISTGLRTSKFGIPSEEVVSIYREASELPGISPCGIHCHIGSQILDTSPFKETVQKMMDLVEKVVEIGIHLEFVDMGSGLGIPYKKGEPAPTPQDHADAILPLFKERTEALGISPVLILEPGRYIVADTTILLTRVNTVKKAVKNFVGVDAGFNLLIRPAMYDSYHHVVVANKASSPPEDIYTIAGPICETGDILAKDRELPRVEKGDLIALLDAGAYGFSMSSQYNGRPRCAEVLVKNGASDLIRSREDVEDLLAKQRLPARLM*