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SR-VP_26_10_2019_2_100cm_scaffold_8786

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_8786_1
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(3..1304)
DNA (1302bp) protein (434aa)
Radical SAM n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YPG0_9CHLB
Radical SAM {ECO:0000313|EMBL:EAT58170.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
radical SAM protein
SR-VP_26_10_2019_2_100cm_scaffold_8786_2
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(1261..1518)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YPG1_9CHLB
Uncharacterized protein {ECO:0000313|EMBL:EAT58184.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
SR-VP_26_10_2019_2_100cm_scaffold_8786_3
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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1794..2714
DNA (921bp) protein (307aa)
Kelch repeat-containing protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAQ2_MEISD
Kelch repeat-containing protein
Kelch repeat-containing protein {ECO:0000313|EMBL:ADH62574.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
SR-VP_26_10_2019_2_100cm_scaffold_8786_4
unknown

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3141..4925
DNA (1785bp) protein (595aa)
Glycyl-tRNA synthetase, dimeric type n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTS6_METHD
glycyl-tRNA synthetase, dimeric type
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8786_5
unknown

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comp(5127..5288)
DNA (162bp) protein (54aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_8786_6
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5487..6239
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Formosa sp. AK20 RepID=M7N938_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGL59046.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_8786_7
AR4, Woesearchaeaota, DPANN, Archaea

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comp(6474..6737)
DNA (264bp) protein (88aa)
SpoVT/AbrB family transcription regulator id=5044907 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
SR-VP_26_10_2019_2_100cm_scaffold_8786_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6926..7945
DNA (1020bp) protein (340aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphomethylpyrimidine synthase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WJW9_METH6
Thiamine biosynthesis protein ThiC
SR-VP_26_10_2019_2_100cm_scaffold_8786_9
unknown

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8271..9047
DNA (777bp) protein (259aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_8786_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9307..10305)
DNA (999bp) protein (333aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RNA 3'-terminal phosphate cyclase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q368_METMZ
RNA 3'-terminal phosphate cyclase
SR-VP_26_10_2019_2_100cm_scaffold_8786_11
unknown

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comp(10313..10903)
DNA (591bp) protein (197aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZW3_METMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8786_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11113..12561)
DNA (1449bp) protein (483aa)
glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9Q4_9ARCH
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 12 items

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