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SR-VP_26_10_2019_2_100cm_scaffold_3052

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_3052_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..264
DNA (264bp) protein (88aa)
GTP-binding protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPR7_METH6
Putative GTPase {ECO:0000313|EMBL:KCZ71086.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
GTP-binding protein
SR-VP_26_10_2019_2_100cm_scaffold_3052_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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287..499
DNA (213bp) protein (71aa)
Preprotein translocase subunit SecG n=1 Tax=uncultured archaeon GZfos17F1 RepID=Q64DS6_9ARCH
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
preprotein translocase subunit SecG
SR-VP_26_10_2019_2_100cm_scaffold_3052_3
unknown

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552..1367
DNA (816bp) protein (272aa)
Shikimate dehydrogenase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KSY5_METHD
shikimate 5-dehydrogenase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1364..2665
DNA (1302bp) protein (434aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:KCZ73280.1}; EC=1.3.1.12 {ECO:0000313|EMBL:KCZ73280.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1BFE7 related cluster n=1 Tax=unknown RepID=UPI0003D1BFE7
prephenate dehydrogenase
SR-VP_26_10_2019_2_100cm_scaffold_3052_5
unknown

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2716..2955
DNA (240bp) protein (80aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_6
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

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3082..4203
DNA (1122bp) protein (374aa)
Radical SAM n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NS46_9DELT
radical SAM protein
Tax=RBG_16_OP11_Levybacteria_35_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_7
unknown

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4191..4478
DNA (288bp) protein (96aa)
Marine sediment metagenome DNA, contig: S06H3_L01342 {ECO:0000313|EMBL:GAI03487.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2019_2_100cm_scaffold_3052_8
unknown

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4505..4666
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B4B366
Marine sediment metagenome DNA, contig: S12H4_L03276 {ECO:0000313|EMBL:GAI78176.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2019_2_100cm_scaffold_3052_9
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4632..5519
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B67B1D
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_44_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_10
unknown

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5612..7384
DNA (1773bp) protein (591aa)
Asparagine synthetase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NS49_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKL73951.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
asparagine synthase
SR-VP_26_10_2019_2_100cm_scaffold_3052_11
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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7519..9297
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NS47_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EAT04528.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
SR-VP_26_10_2019_2_100cm_scaffold_3052_12
GWA2_OP3X_41_15_curated, Omnitrophica, Bacteria

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9319..10551
DNA (1233bp) protein (411aa)
Glycosyl transferase, group 1 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFB7_9DELT
glycosyl transferase group 1 family protein
Tax=GWA2_OP3X_41_15_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_trna_1
unknown

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comp(10655..10729)
DNA (75bp)
transferRNA Met
SR-VP_26_10_2019_2_100cm_scaffold_3052_13
unknown

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10803..11963
DNA (1161bp) protein (387aa)
Putative daunorubicin resistance ABC transporter, ATP-binding protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEZ6_9EURY
putative daunorubicin resistance ABC transporter, ATP-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_14
unknown

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11963..12739
DNA (777bp) protein (259aa)
ABC-2 type transporter n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQR9_METZD
ABC-2 type transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12741..13643
DNA (903bp) protein (301aa)
2-phospho-L-lactate transferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0D3_METHD
2-phospho-L-lactate transferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3052_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(13739..14092)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7M7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43373.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
SR-VP_26_10_2019_2_100cm_scaffold_3052_17
unknown

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comp(14092..14640)
DNA (549bp) protein (183aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3052_18
unknown

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comp(14721..15032)
DNA (312bp) protein (104aa)
UPI0003D1A58D related cluster n=1 Tax=unknown RepID=UPI0003D1A58D
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_19
unknown

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comp(15025..15243)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQD0_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3052_20
unknown

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15735..15905
DNA (171bp) protein (57aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3052_21
unknown

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15922..16053
DNA (132bp) protein (44aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3052_22
unknown

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16153..16725
DNA (573bp) protein (191aa)
Putative nucleotidyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I429_METCZ
nucleotidyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 23 items

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