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SR-VP_26_10_2019_2_100cm_scaffold_4475

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_4475_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..1002
DNA (1002bp) protein (334aa)
Chaperone protein DnaJ n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQC7_METH6
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Chaperone protein DnaJ
SR-VP_26_10_2019_2_100cm_scaffold_4475_2
unknown

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comp(1006..1260)
DNA (255bp) protein (85aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_3
unknown

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comp(1517..2122)
DNA (606bp) protein (202aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_4
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

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comp(2365..3099)
DNA (735bp) protein (245aa)
hypothetical protein HKM-1_13723 id=4535789 bin=GWF2_Lentisphaerae_38_69 species=Halomonas sp. KM-1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hypothetical protein
Tax=GWF2_Lentisphaerae_38_69_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_5
unknown

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comp(3336..4253)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX64_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_6
unknown

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4420..4674
DNA (255bp) protein (85aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_7
unknown

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4686..4823
DNA (138bp) protein (46aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_8
unknown

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4874..5137
DNA (264bp) protein (88aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_9
unknown

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5308..5403
DNA (96bp) protein (32aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_10
unknown

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comp(5489..5824)
DNA (336bp) protein (112aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_11
unknown

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5931..6905
DNA (975bp) protein (325aa)
UPI0003D1B21B related cluster n=1 Tax=unknown RepID=UPI0003D1B21B
porphobilinogen synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_12
unknown

Not on your lists

6905..7330
DNA (426bp) protein (142aa)
peptidase n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI00036CA04B
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7443..8075
DNA (633bp) protein (211aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_4475_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8234..8989)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BP9_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ70284.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Transcriptional repressor of nif and glnA operons
SR-VP_26_10_2019_2_100cm_scaffold_4475_15
unknown

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9106..10080
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5V8_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_16

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10236..11903
DNA (1668bp) protein (556aa)
Probable acyl-coenzyme A synthetase {ECO:0000313|EMBL:CBH39220.1}; EC=6.2.1.2 {ECO:0000313|EMBL:CBH39220.1};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Probable acyl-coenzyme A synthetase n=1 Tax=uncultured archaeon RepID=D1JAU0_9ARCH
AMP-dependent synthetase and ligase
SR-VP_26_10_2019_2_100cm_scaffold_4475_17
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11949..12713
DNA (765bp) protein (255aa)
Putative GTPase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYZ9_METHD
putative GTPase
Putative GTPase {ECO:0000313|EMBL:AGB50316.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_26_10_2019_2_100cm_scaffold_4475_18
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12727..12921)
DNA (195bp) protein (65aa)
UPI0003D1B458 related cluster n=1 Tax=unknown RepID=UPI0003D1B458
Uncharacterized protein {ECO:0000313|EMBL:AKB22546.1}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_4475_19
unknown

Not on your lists

13004..13189
DNA (186bp) protein (62aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_20
unknown

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comp(13169..13621)
DNA (453bp) protein (151aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_21
unknown

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comp(13643..14011)
DNA (369bp) protein (123aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4475_22
unknown

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comp(14296..14424)
DNA (129bp) protein (43aa)
AIR synthase related protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14508..15050
DNA (543bp) protein (181aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73598.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_4475_24
unknown

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comp(15212..16528)
DNA (1317bp) protein (439aa)
Hydrogenase maturation factor n=1 Tax=uncultured archaeon GZfos18C8 RepID=Q64DF7_9ARCH
AIR synthase related protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_25
unknown

Not on your lists

comp(16518..17129)
DNA (612bp) protein (204aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12V39_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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17332..17871
DNA (540bp) protein (180aa)
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSK2_9BACT
ABC transporter
Tax=RBG_13_Bathyarchaeota_46_16b_curated
SR-VP_26_10_2019_2_100cm_scaffold_4475_27
unknown

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17913..18023
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 27 items

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