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SR-VP_26_10_2019_2_100cm_scaffold_2140

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2140_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..1118
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8V2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KCZ73237.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2140_2
unknown

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comp(1164..1418)
DNA (255bp) protein (85aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_3
unknown

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1512..2261
DNA (750bp) protein (250aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_4
unknown

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2267..2680
DNA (414bp) protein (138aa)
Roadblock/LC7 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Roadblock/LC7 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2706..3251
DNA (546bp) protein (182aa)
Putative transcriptional regulator, ModE family n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQL9_METZD
Molybdenum-pterin binding domain {ECO:0000313|EMBL:KCZ73097.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative ModE family transcriptional regulator
SR-VP_26_10_2019_2_100cm_scaffold_2140_6
unknown

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3351..4235
DNA (885bp) protein (295aa)
ABC-type tungstate transport system, permease component n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GH75_9FIRM
tungsten ABC transporter substrate-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_7
unknown

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4256..4927
DNA (672bp) protein (224aa)
Formylmethanofuran dehydrogenase subunit E n=1 Tax=Methanobacterium sp. MB1 RepID=U6EB50_9EURY
formylmethanofuran dehydrogenase subunit E
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_8
unknown

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4931..5959
DNA (1029bp) protein (343aa)
Molybdenum formylmethanofuran dehydrogenase, subunit F n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WNG0_METH6
Molybdenum formylmethanofuran dehydrogenase, subunit F
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_9
unknown

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5959..7731
DNA (1773bp) protein (591aa)
UPI0003D1BF16 related cluster n=1 Tax=unknown RepID=UPI0003D1BF16
fmdA; formylmethanofuran dehydrogenase subunit A
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_10
unknown

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7737..8546
DNA (810bp) protein (270aa)
Formylmethanofuran dehydrogenase subunit C n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWB0_METHD
formylmethanofuran dehydrogenase subunit C
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_11
unknown

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8550..8945
DNA (396bp) protein (132aa)
fmdD; molybdenum-containing formylmethanofuran dehydrogenase (EC:1.2.99.5)
Molybdenum-containing formylmethanofuran dehydrogenase n=2 Tax=Methanosarcina mazei RepID=Q8PWL6_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_12
unknown

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8947..10254
DNA (1308bp) protein (436aa)
fmdB; formylmethanofuran dehydrogenase subunit B (EC:1.2.99.5)
Formylmethanofuran dehydrogenase subunit B n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BV64_METCG
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_13
unknown

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10262..11089
DNA (828bp) protein (276aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MID0_9EURY
formate dehydrogenase family accessory protein FdhD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_14
unknown

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11126..12598
DNA (1473bp) protein (491aa)
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.16)
Glycine betaine aldehyde dehydrogenase id=2310940 bin=GWA2_Elusimicrobia_69_24 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12595..13776
DNA (1182bp) protein (394aa)
Molybdenum cofactor synthesis domain {ECO:0000313|EMBL:KCZ73341.1}; EC=2.10.1.1 {ECO:0000313|EMBL:KCZ73341.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molybdenum cofactor biosynthesis protein (MoeA-3) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30076_ARCFU
moeA-3; molybdenum cofactor biosynthesis protein A
SR-VP_26_10_2019_2_100cm_scaffold_2140_16
unknown

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13809..14543
DNA (735bp) protein (245aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CRT5_9EURY
molybdenum ABC transporter permease
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_17
unknown

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14545..15270
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein, putative n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AHF0_PYRYC
ABC transporter ATP-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15286..16638)
DNA (1353bp) protein (451aa)
16S rRNA m(5)C 967 methyltransferase id=3904934 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
sun protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2140_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16628..17206)
DNA (579bp) protein (193aa)
ZPR1-like zinc finger protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFW5_9EURY
ZPR1-related zinc finger protein {ECO:0000313|EMBL:KCZ70577.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ZPR1-like zinc finger protein
SR-VP_26_10_2019_2_100cm_scaffold_2140_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17203..17574)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZC8_METBU
Uncharacterized protein {ECO:0000313|EMBL:KCZ70576.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2140_21
unknown

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comp(17616..18098)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0Z6_METPS
putative RNA-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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18262..18477
DNA (216bp) protein (72aa)
Putative snRNP Sm-like protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY05_METHD
Putative snRNP Sm-like protein {ECO:0000256|HAMAP-Rule:MF_00257}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small nuclear ribonucleoprotein
SR-VP_26_10_2019_2_100cm_scaffold_2140_23
unknown

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18682..20082
DNA (1401bp) protein (467aa)
UPI0003D1ADD7 related cluster n=1 Tax=unknown RepID=UPI0003D1ADD7
amidophosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2140_24
unknown

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20201..20776
DNA (576bp) protein (192aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2140_25
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20814..21263
DNA (450bp) protein (150aa)
DNA polymerase beta domain protein region n=2 Tax=Sulfolobus islandicus RepID=F0NGY0_SULIR
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 25 items

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