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SR-VP_26_10_2019_C_40cm_scaffold_412

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_412_1
unknown

Not on your lists

491..1387
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C5R3_9PLAN
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_2
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(1681..2544)
DNA (864bp) protein (288aa)
Peptide/nickel transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S9Y9_9BACT
oligopeptide/dipeptide ABC transporter ATPase
Tax=RBG_16_Chloroflexi_58_8_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_3
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(2600..3586)
DNA (987bp) protein (329aa)
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RT93_9CLOT
oligopeptide/dipeptide ABC transporter ATP-binding protein
Tax=RBG_13_Chloroflexi_48_17_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_4
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(3561..4463)
DNA (903bp) protein (301aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LF78_9EURY
dipeptide/oligopeptide/nickel ABC transporter permease
Tax=RBG_13_Chloroflexi_48_17_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_5
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(4555..5517)
DNA (963bp) protein (321aa)
Dipeptide/oligopeptide/nickel ABC transporter permease n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HRD1_9EURY
dppB3; dipeptide/oligopeptide/nickel ABC transporter permease
Tax=RBG_13_Chloroflexi_48_17_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_6
unknown

Not on your lists

comp(5575..6561)
DNA (987bp) protein (329aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S854_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6565..7155)
DNA (591bp) protein (197aa)
Holliday junction DNA helicase subunit RuvA {ECO:0000313|EMBL:KCZ73525.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KCZ73525.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Holliday junction DNA helicase RuvA n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LKI0_METBM
ruvA; holliday junction DNA helicase RuvA
SR-VP_26_10_2019_C_40cm_scaffold_412_8
unknown

Not on your lists

comp(7410..8174)
DNA (765bp) protein (255aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_412_9
unknown

Not on your lists

comp(8174..8434)
DNA (261bp) protein (87aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_412_10
unknown

Not on your lists

comp(8849..9334)
DNA (486bp) protein (162aa)
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Holliday junction endonuclease RuvC n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZN5_9EURY
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9372..10193)
DNA (822bp) protein (274aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MIW7_9EURY
NAD(+) kinase
SR-VP_26_10_2019_C_40cm_scaffold_412_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10200..10976)
DNA (777bp) protein (259aa)
Inositol-1-monophosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase n=2 Tax=Methanosarcina mazei RepID=M1PC56_METMZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_412_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10983..12023)
DNA (1041bp) protein (347aa)
Elongation factor Tu domain 2 protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5S8_METEZ
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:KCZ73528.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
elongation factor Tu domain 2 protein
SR-VP_26_10_2019_C_40cm_scaffold_412_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


12194..12775
DNA (582bp) protein (194aa)
30S ribosomal protein S3Ae n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW87_METCG
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rpsC; 30S ribosomal protein S3Ae
SR-VP_26_10_2019_C_40cm_scaffold_412_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12781..13467)
DNA (687bp) protein (229aa)
UPI0003D1B57B related cluster n=1 Tax=unknown RepID=UPI0003D1B57B
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:KCZ70410.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cytochrome c assembly protein
SR-VP_26_10_2019_C_40cm_scaffold_412_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13521..14210)
DNA (690bp) protein (230aa)
UPI0003D1C721 related cluster n=1 Tax=unknown RepID=UPI0003D1C721
ABC heme exporter, inner membrane subunit B
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_412_17
unknown

Not on your lists

comp(14207..14935)
DNA (729bp) protein (243aa)
UPI0003D1A9B4 related cluster n=1 Tax=unknown RepID=UPI0003D1A9B4
ABC heme exporter, ATPase subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15124..16326
DNA (1203bp) protein (401aa)
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:KCZ72571.1}; EC=4.1.2.43 {ECO:0000313|EMBL:KCZ72571.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator n=1 Tax=Methanolobus psychrophilus R15 RepID=K4ME09_9EURY
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
SR-VP_26_10_2019_C_40cm_scaffold_412_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16455..17330
DNA (876bp) protein (292aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB97_METEZ
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72570.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative signal transduction protein
SR-VP_26_10_2019_C_40cm_scaffold_412_20
unknown

Not on your lists

comp(17324..18139)
DNA (816bp) protein (272aa)
guaB-2; putative inosine-5\'-monophosphate dehydrogenase (EC:1.1.1.205)
Putative inosine-5\'-monophosphate dehydrogenase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1M4_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_21
unknown

Not on your lists

18236..18751
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369DF41
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_22
unknown

Not on your lists

18752..19585
DNA (834bp) protein (278aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKQ5_METZD
xylose isomerase domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19626..20720
DNA (1095bp) protein (365aa)
FO synthase subunit 2 {ECO:0000313|EMBL:KCZ72509.1}; EC=2.5.1.77 {ECO:0000313|EMBL:KCZ72509.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative menaquinone biosynthesis protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJL2_DESK7
menaquinone biosynthesis protein
SR-VP_26_10_2019_C_40cm_scaffold_412_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20734..21435)
DNA (702bp) protein (234aa)
UPF0264 protein Mpsy_1294 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDK2_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_412_25
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21610..21828
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7E8_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_412_26
unknown

Not on your lists

21825..22079
DNA (255bp) protein (85aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LVN9_9EURY
RelE protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_412_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22110..22823
DNA (714bp) protein (238aa)
HisA/hisF family protein {ECO:0000313|EMBL:KCZ72505.1}; EC=5.3.1.16 {ECO:0000313|EMBL:KCZ72505.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Histidine biosynthesis protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7G7_METEZ
histidine biosynthesis protein
SR-VP_26_10_2019_C_40cm_scaffold_412_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22861..23451
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QVP9_VULM7
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_412_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23448..23810)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C5I1_THEGP
Uncharacterized protein {ECO:0000313|EMBL:KCZ73066.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_412_30
unknown

Not on your lists

23900..25258
DNA (1359bp) protein (453aa)
Nicotinate phosphoribosyltransferase id=5007297 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
nicotinate phosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 89 in total

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