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SR-VP_26_10_2019_C_40cm_scaffold_294_25

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: 28581..29693

Top 3 Functional Annotations

Value Algorithm Source
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 367.0
  • Bit_score: 659
  • Evalue 1.50e-186
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC:5.3.3.2) similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 361.0
  • Bit_score: 469
  • Evalue 4.50e-130
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=IDI2_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 361.0
  • Bit_score: 469
  • Evalue 1.60e-129

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1113
ATGACCACATCGGACAGGAAGATCGAACACTTATTATTATGCGTTGAAAAGAACGTTGAATCCCATAAATCATATTTAGGGCTTCGGGCTTCAGGTTTTGATGACGTGGATCTTGTTCATAACTGCCTTCCTGAAATCAATAAAAAAAACCTTGATCTGGAAATTGAGTTTCTGGGCAAGAAATTGAGTGCTCCAATACTGATTGCTTCAATGACAGGCGGACACCCTGACACTACAGCGGTAAATGCCGCGCTTGCAGGTGCGGCTGAAGAGCTTGGAATAGGAATAGGTGTGGGAAGCCAGAGAGCAGCGATAGAAGACCCGGCCCTTGAAGATTCATTCAGGATAGTCAGGGACAAGGCCCCCAATGCATTCGTATATGGAAATGTAGGTGCTGCACAACTCGAAGAATTCGGAATAGAAGGACTTGAGCGGGCTGTAGAGATGATAAAGGCCGATGCCATGGCGGTTCACCTGAATTTTCTCCAGGAAGCCATACAGCCAGAAGGCAACATTGACGCCACAGGATGTCTTGATTCGATCAAGAAAGTCTGCGATGAGCTCTCGGTGCCAGTGATAGTCAAGGAGACGGGTGCCGGCATTTCACATTCGCAGGCTGTGGCGATATGCGAGGCCGGGGCTGCGGCCATAGATATAGGCGGTCTTGGAGGAACGAGCTGGGCCGGGGTTGAGACATATCGCGCCCAGAAACGAGGAGACCTGCTATCAGATCATCTGGGAAAGCAATTCTGGAACTGGGGAATACCAACAGTTACCAGCATCGTAGAATCCACGATATCGGTGCCTGTTATCGCAACAGGCGGAGTGCGCTCCGGGCTTGATGTAGCAAAATCAATTGCACTCGGTTCGTCACTTTGCGGCATAGCACTGCCTCTGGTAGCGCCTGCATTGAAAGGTCAAAAAGATGTTGTGGATAAACTGACCATGGTTATTGAAGAACTCAAAGTTGCGATGTTCTTAAGCGGATGCAGGACTGTTGAGGAGCTTGGAAATGCCCCTGCGGTCATCACAGGCAAAACGAAGGAATTCCTGGAGCAAAGGGGATTTGAGACAGCTAGATTTGCCAGAAAAAGATATAAAAATATAAAATAA
PROTEIN sequence
Length: 371
MTTSDRKIEHLLLCVEKNVESHKSYLGLRASGFDDVDLVHNCLPEINKKNLDLEIEFLGKKLSAPILIASMTGGHPDTTAVNAALAGAAEELGIGIGVGSQRAAIEDPALEDSFRIVRDKAPNAFVYGNVGAAQLEEFGIEGLERAVEMIKADAMAVHLNFLQEAIQPEGNIDATGCLDSIKKVCDELSVPVIVKETGAGISHSQAVAICEAGAAAIDIGGLGGTSWAGVETYRAQKRGDLLSDHLGKQFWNWGIPTVTSIVESTISVPVIATGGVRSGLDVAKSIALGSSLCGIALPLVAPALKGQKDVVDKLTMVIEELKVAMFLSGCRTVEELGNAPAVITGKTKEFLEQRGFETARFARKRYKNIK*