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SR-VP_26_10_2019_C_40cm_scaffold_294

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_294_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(501..800)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVZ0_METCG
Uncharacterized protein {ECO:0000313|EMBL:KCZ71098.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_294_2
unknown

Not on your lists

comp(1825..1995)
DNA (171bp) protein (57aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_294_3
unknown

Not on your lists

comp(2090..2215)
DNA (126bp) protein (42aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_294_4

Not on your lists

comp(2503..5115)
DNA (2613bp) protein (871aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JFL4_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37322.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_294_5
unknown

Not on your lists

5285..6253
DNA (969bp) protein (323aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_294_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6668..7036)
DNA (369bp) protein (123aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_294_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7539..10292
DNA (2754bp) protein (918aa)
Aconitase {ECO:0000313|EMBL:KCZ71552.1}; EC=4.2.1.3 {ECO:0000313|EMBL:KCZ71552.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Aconitate hydratase (EC:4.2.1.3)
Aconitase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46EK0_METBF
SR-VP_26_10_2019_C_40cm_scaffold_294_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10507..12210
DNA (1704bp) protein (568aa)
signal transduction histidine kinase id=24428418 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_294_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12758..14674
DNA (1917bp) protein (639aa)
Threonine--tRNA ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUG7_METHD
threonyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_294_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

14836..16080
DNA (1245bp) protein (415aa)
3-isopropylmalate dehydratase large subunit n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KU49_METHD
Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 (large subunit)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_294_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16102..17148)
DNA (1047bp) protein (349aa)
Radical SAM domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP01_METZD
TIGR01210 family protein {ECO:0000313|EMBL:KCZ70904.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
radical SAM protein
SR-VP_26_10_2019_C_40cm_scaffold_294_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17145..18059)
DNA (915bp) protein (305aa)
UPI0003D1AAD6 related cluster n=1 Tax=unknown RepID=UPI0003D1AAD6
GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_294_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(18296..19153)
DNA (858bp) protein (286aa)
MscS mechanosensitive ion channel n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LIY6_METBM
MscS mechanosensitive ion channel
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_294_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19263..20225
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000374E0A9
putative S1 family peptidase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_294_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20235..21131)
DNA (897bp) protein (299aa)
Integral membrane protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKB9_METAC
integral membrane protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_294_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21133..21723)
DNA (591bp) protein (197aa)
Hypothetical membrane protein id=1768372 bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
isoprenylcysteine carboxyl methyltransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_294_17
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21750..21953)
DNA (204bp) protein (68aa)
Transcriptional regulator, XRE family n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RH51_METP4
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADN35275.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847); (Methanoplanus petrolearius).;"
SR-VP_26_10_2019_C_40cm_scaffold_294_18
unknown

Not on your lists

comp(21962..22360)
DNA (399bp) protein (133aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_294_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22758..24137)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035C4732
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:KCZ71410.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
FAD linked oxidase domain protein
SR-VP_26_10_2019_C_40cm_scaffold_294_20
unknown

Not on your lists

comp(24316..24546)
DNA (231bp) protein (77aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_294_21
unknown

Not on your lists

comp(25283..25447)
DNA (165bp) protein (55aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_294_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25802..26479)
DNA (678bp) protein (226aa)
Superoxide dismutase {ECO:0000313|EMBL:KCZ73193.1}; EC=1.15.1.1 {ECO:0000313|EMBL:KCZ73193.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B535FC
SR-VP_26_10_2019_C_40cm_scaffold_294_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26891..27787
DNA (897bp) protein (299aa)
Mevalonate kinase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P9L6_METMZ
Mevalonate kinase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_294_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27784..28548
DNA (765bp) protein (255aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Isopentenyl phosphate kinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TH9_METBU
aspartate/glutamate/uridylate kinase
SR-VP_26_10_2019_C_40cm_scaffold_294_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28581..29693
DNA (1113bp) protein (371aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=IDI2_METBF
SR-VP_26_10_2019_C_40cm_scaffold_294_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

29713..31050
DNA (1338bp) protein (446aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Metallo-beta-lactamase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT34_METAC
metallo-beta-lactamase
SR-VP_26_10_2019_C_40cm_scaffold_294_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

31047..32009
DNA (963bp) protein (321aa)
farnesyltranstransferase (EC:2.5.1.29)
Farnesyltranstransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLQ9_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_294_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

32047..33252
DNA (1206bp) protein (402aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Threonine synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL04_METZD
threonine synthase
SR-VP_26_10_2019_C_40cm_scaffold_294_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

33623..34585
DNA (963bp) protein (321aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71200.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_294_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

34670..35599
DNA (930bp) protein (310aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71201.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Hypothetical conserved protein id=4900883 bin=GWA2_Elusimicrobia_66_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Displaying items 1-30 of 96 in total

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