ggKbase home page

LC_0.1_scaffold_2455

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_2455_1
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2..982)
DNA (981bp) protein (327aa)
Glycoside hydrolase family 12 n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GE26_SPITZ
glycosyl hydrolase family 12 protein, TPS linker, domain X
Glycoside hydrolase family 12 {ECO:0000313|EMBL:AEJ60658.1}; Flags: Precursor;; TaxID=869211 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203).;"
LC_0.1_scaffold_2455_2
unknown

Not on your lists

comp(1144..1290)
DNA (147bp) protein (49aa)

This feature has no annotations

LC_0.1_scaffold_2455_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1630..2124)
DNA (495bp) protein (165aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
LC_0.1_scaffold_2455_4
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(2157..3596)
DNA (1440bp) protein (480aa)
Gp673 n=1 Tax=Bacillus phage G RepID=G3MB53_9CAUD
polysaccharide deacetylase
Tax=RBG_16_Chloroflexi_50_9_curated
LC_0.1_scaffold_2455_5
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3599..3796)
DNA (198bp) protein (66aa)
Transposase, IS605 OrfB family n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E921_METEZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB73880.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
LC_0.1_scaffold_2455_6
unknown

Not on your lists

comp(3780..4715)
DNA (936bp) protein (312aa)

This feature has no annotations

LC_0.1_scaffold_2455_7
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

comp(4792..6333)
DNA (1542bp) protein (514aa)
Beta-lactamase-like protein 1 n=1 Tax=Dictyostelium discoideum RepID=BLML1_DICDI
batC; aerotolerance-like exported protein BatC
Beta-lactamase-like protein 1; Flags: Precursor;; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
LC_0.1_scaffold_2455_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(6670..7320)
DNA (651bp) protein (217aa)
Putative metal-dependent hydrolase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T2I8_9ARCH
alanyl-tRNA synthetase-related protein
Tax=RBG_16_Micrarchaeota_49_10_curated
LC_0.1_scaffold_2455_9
RifOxyA12_full_OD1_Moranbacteria_35_19_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7395..8507)
DNA (1113bp) protein (371aa)
Radical SAM domain protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MQI6_9FIRM
Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated
LC_0.1_scaffold_2455_10
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8552..9793)
DNA (1242bp) protein (414aa)
Glutamate dehydrogenase family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3R0_9DELT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
Glutamate dehydrogenase (NADP)+
LC_0.1_scaffold_2455_11
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9835..11109)
DNA (1275bp) protein (425aa)
CapK related-protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CTC2_METMJ
CapK related-protein
CapK related-protein {ECO:0000313|EMBL:ABN56622.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
LC_0.1_scaffold_2455_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11275..12597)
DNA (1323bp) protein (441aa)
Putative polysaccharide biosynthesis protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MH41_9EURY
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:KCZ71725.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative polysaccharide biosynthesis protein
LC_0.1_scaffold_2455_13
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

Not on your lists

comp(12606..14507)
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TWM8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EMR74266.1}; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
Displaying 13 items

View Taxonomy