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LC_0.1_scaffold_3572

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LC_0.1_scaffold_3572_1
CG_CPR03_02, CG_CPR03, Bacteria

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comp(52..831)
DNA (780bp) protein (260aa)
Tax=CG_CPR03_02
LC_0.1_scaffold_3572_2
unknown

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comp(855..1460)
DNA (606bp) protein (202aa)

This feature has no annotations

LC_0.1_scaffold_3572_3
unknown

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comp(1463..1723)
DNA (261bp) protein (87aa)

This feature has no annotations

LC_0.1_scaffold_3572_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1905..3557)
DNA (1653bp) protein (551aa)
Replication factor C large subunit n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KW53_METHD
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256|HAMAP-Rule:MF_01508}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA polymerase III, gamma/tau subunit
LC_0.1_scaffold_3572_5
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(3737..4114)
DNA (378bp) protein (126aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
Peptidyl-tRNA hydrolase n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=PTH_THEON
LC_0.1_scaffold_3572_6
unknown

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comp(4333..4488)
DNA (156bp) protein (52aa)

This feature has no annotations

LC_0.1_scaffold_3572_7
unknown

Not on your lists

comp(4485..5201)
DNA (717bp) protein (239aa)

This feature has no annotations

LC_0.1_scaffold_3572_8
unknown

Not on your lists

comp(5492..5713)
DNA (222bp) protein (74aa)

This feature has no annotations

LC_0.1_scaffold_3572_9
unknown

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comp(5725..6414)
DNA (690bp) protein (230aa)

This feature has no annotations

LC_0.1_scaffold_3572_10
Mortierella verticillata, Mortierella, Mortierellales, Fungi

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comp(6380..6559)
DNA (180bp) protein (60aa)
GJ11100 n=1 Tax=Drosophila virilis RepID=B4LST2_DROVI
Uncharacterized protein {ECO:0000313|EMBL:KFH61814.1}; TaxID=1069443 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mortierellomycotina; Mortierellales; Mortierellaceae; Mortierella.;" source="Mortierella verticillata NRRL 6337.;"
LC_0.1_scaffold_3572_11
unknown

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comp(6793..7365)
DNA (573bp) protein (191aa)

This feature has no annotations

LC_0.1_scaffold_3572_12
unknown

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comp(7600..7794)
DNA (195bp) protein (65aa)

This feature has no annotations

LC_0.1_scaffold_3572_13
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(7794..8228)
DNA (435bp) protein (145aa)
CMP/dCMP deaminase zinc-binding protein; K01493 dCMP deaminase [EC:3.5.4.12] id=24398893 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
CMP/dCMP deaminase zinc-binding protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
LC_0.1_scaffold_3572_14
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8281..8574)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DTY7_DESRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG59005.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
LC_0.1_scaffold_3572_15
unknown

Not on your lists

comp(8636..8932)
DNA (297bp) protein (99aa)

This feature has no annotations

LC_0.1_scaffold_3572_16
unknown

Not on your lists

comp(8994..9128)
DNA (135bp) protein (45aa)

This feature has no annotations

LC_0.1_scaffold_3572_17
unknown

Not on your lists

comp(9197..9439)
DNA (243bp) protein (81aa)

This feature has no annotations

LC_0.1_scaffold_3572_18
unknown

Not on your lists

comp(9499..10074)
DNA (576bp) protein (192aa)

This feature has no annotations

LC_0.1_scaffold_3572_19
unknown

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comp(10078..10551)
DNA (474bp) protein (158aa)

This feature has no annotations

LC_0.1_scaffold_3572_20
unknown

Not on your lists

comp(10719..11123)
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying 20 items

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