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rifcsphigho2_12_scaffold_11289

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_11289_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..265)
DNA (264bp) protein (88aa)
Glycosyltransferase (EC:2.4.1.-)
Glycosyl transferase group 1 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWA7_METFV
Uncharacterized protein {ECO:0000313|EMBL:KKG07958.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
rifcsphigho2_12_scaffold_11289_2
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(285..1286)
DNA (1002bp) protein (334aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AEG18384.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEG18384.1};; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae
UDP-glucose 4-epimerase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D717_METSW rbh
rifcsphigho2_12_scaffold_11289_3
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1288..2229)
DNA (942bp) protein (314aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKB43106.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AKB43106.1};; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcin
dTDP-glucose 4,6-dehydratase related protein n=2 Tax=Methanothermobacter thermautotrophicus RepID=O26473_METTH rbh
rifcsphigho2_12_scaffold_11289_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2263..3246)
DNA (984bp) protein (328aa)
Abortive infection protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EC10_METEZ
CAAX amino terminal protease family {ECO:0000313|EMBL:KCZ71723.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methano
abortive infection protein
rifcsphigho2_12_scaffold_11289_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3228..4088)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q2X1_METMZ rbh
Putative membrane protein {ECO:0000313|EMBL:KCZ71724.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;
hypothetical protein
rifcsphigho2_12_scaffold_11289_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4254..5009)
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72442.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
rifcsphigho2_12_scaffold_11289_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5012..5692)
DNA (681bp) protein (227aa)
Eight transmembrane protein EpsH, putative exosortase {ECO:0000313|EMBL:KCZ72441.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae;
Exosortase 1 id=2882462 bin=GWF2_OP3_43_52 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
rifcsphigho2_12_scaffold_11289_8
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(6543..8234)
DNA (1692bp) protein (564aa)
Gp673 n=1 Tax=Bacillus phage G RepID=G3MB53_9CAUD
polysaccharide deacetylase Tax=RBG_16_Chloroflexi_50_9_curated
Polysaccharide deacetylase domain-containing protein
rifcsphigho2_12_scaffold_11289_9
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8392..10122)
DNA (1731bp) protein (577aa)
Putative lipoprotein n=2 Tax=Myxococcus xanthus RepID=Q1DBD0_MYXXD
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABF87440.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
rifcsphigho2_12_scaffold_11289_10
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10243..11484)
DNA (1242bp) protein (414aa)
Putative lipoprotein n=2 Tax=Myxococcus xanthus RepID=Q1DBD0_MYXXD
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABF87440.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
rifcsphigho2_12_scaffold_11289_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11606..15601)
DNA (3996bp) protein (1332aa)
Putative chloride channel n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PU63_METMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ70815.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
chloride channel
rifcsphigho2_12_scaffold_11289_12
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15671..17842)
DNA (2172bp) protein (724aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D712_METSW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG18379.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacter
rifcsphigho2_12_scaffold_11289_13
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17847..18716)
DNA (870bp) protein (290aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS63_METMA
Glycosyltransferase {ECO:0000313|EMBL:AKB76675.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horon
glycosyltransferase
rifcsphigho2_12_scaffold_11289_14
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(18732..19253)
DNA (522bp) protein (174aa)
Beta-1,4-galactosyltransferase n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVM6_THEON
beta-1,4-galactosyltransferase
Beta-1,4-galactosyltransferase {ECO:0000313|EMBL:ACJ17350.1}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineu
rifcsphigho2_12_scaffold_11289_15
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19250..19702)
DNA (453bp) protein (151aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TNV7_METAC
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:AKB29147.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" sou
cps; capsular polysaccharide biosynthesis protein
rifcsphigho2_12_scaffold_11289_16

Not on your lists

comp(19699..20568)
DNA (870bp) protein (290aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDS6_ARCPA
Marine sediment metagenome DNA, contig: S06H3_C04049 {ECO:0000313|EMBL:GAI14910.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_12_scaffold_11289_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(20610..20900)
DNA (291bp) protein (97aa)
UPI0003D1AAC2 related cluster Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 17 items

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