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CG02_land_8_20_14_3.00_150_scaffold_5679_c

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG02_land_8_20_14_3.00_150_scaffold_5679_c_1
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

2..1297
DNA (1296bp) protein (432aa)
Uncharacterized protein Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3M1_THEGP
hypothetical protein
Tax=RBG_13_Nitrospirae_43_8_curated
CG02_land_8_20_14_3.00_150_scaffold_5679_c_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

1481..2512
DNA (1032bp) protein (344aa)
Lipopolysaccharide biosynthesis protein bin=GWF2_Nitrospirae_44_13 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
lipopolysaccharide biosynthesis protein
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
CG02_land_8_20_14_3.00_150_scaffold_5679_c_3
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

2487..3305
DNA (819bp) protein (273aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
signal peptide
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_4
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(3302..3904)
DNA (603bp) protein (201aa)
NADPH-dependent fmn reductase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
NADPH-dependent fmn reductase
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_5
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(3905..4576)
DNA (672bp) protein (224aa)
hypothetical protein bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_6
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(4594..4692)
DNA (99bp) protein (33aa)
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_7
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

4968..5150
DNA (183bp) protein (61aa)
Conserved domain protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK65_THEYD
hypothetical protein
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_8
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

5272..6480
DNA (1209bp) protein (403aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_9
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

6449..7969
DNA (1521bp) protein (507aa)
Deoxyribonuclease, TatD family bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
TatD family deoxyribonuclease
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_10
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists


comp(7985..9229)
DNA (1245bp) protein (415aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_11
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(9226..9705)
DNA (480bp) protein (160aa)
Cell-division initiation protein bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cell-division initiation protein
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_12
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(9702..10016)
DNA (315bp) protein (105aa)
Yggt family protein bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
yggt family protein
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_13
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(10017..10802)
DNA (786bp) protein (262aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_14
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(10807..11544)
DNA (738bp) protein (246aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_15
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(11775..12038)
DNA (264bp) protein (88aa)
Addiction module toxin, Txe/YoeB family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDY6_GEOUR
toxin of toxin-antitoxin system
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_16
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(12035..12277)
DNA (243bp) protein (81aa)
Prevent-host-death family protein bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Prevent-host-death family protein
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_17
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(12845..13348)
DNA (504bp) protein (168aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI000367EBA9
hypothetical protein
Tax=CG_Nitrosp_02
CG02_land_8_20_14_3.00_150_scaffold_5679_c_18
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(13666..14649)
DNA (984bp) protein (328aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=CG_Nitrosp_02
Displaying 18 items

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