ggKbase home page

CG06_land_8_20_14_3.00_150_scaffold_538_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG06_land_8_20_14_3.00_150_scaffold_538_c_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3..614
DNA (612bp) protein (204aa)
ornithine decarboxylase (EC:4.1.1.17)
Ornithine decarboxylase Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PS97_METMA
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

872..1210
DNA (339bp) protein (113aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PEX1_9ZZZZ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1396..2466
DNA (1071bp) protein (357aa)
glycoside hydrolase 15-like protein; K07190 phosphorylase kinase alpha/beta subunit bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
glycoside hydrolase family 15
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2523..2870
DNA (348bp) protein (116aa)
hypothetical protein
id=5103098 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2867..3109)
DNA (243bp) protein (81aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3164..3526)
DNA (363bp) protein (121aa)
id=5800692 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(3735..4343)
DNA (609bp) protein (203aa)
Alanyl-tRNA synthetase Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J0G9_9BACL
Alanyl-tRNA synthetase, class IIc
Tax=CG_Aenigma_01
CG06_land_8_20_14_3.00_150_scaffold_538_c_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4492..5250)
DNA (759bp) protein (253aa)
Putative Transcriptional regulator, TrmB family Tax=Pyrococcus sp. ST04 RepID=I3RCB9_9EURY
Transcriptional regulator, TrmB family
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5363..6184
DNA (822bp) protein (274aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6287..7567
DNA (1281bp) protein (427aa)
MiaB-like tRNA modifying enzyme bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA modification enzyme, miab family
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7644..8480
DNA (837bp) protein (279aa)
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_12
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

8509..9837
DNA (1329bp) protein (443aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LF25_9BACT
Tax=RBG_16_Zixibacteria_48_11_curated
CG06_land_8_20_14_3.00_150_scaffold_538_c_13
unknown

Not on your lists

comp(9840..10559)
DNA (720bp) protein (240aa)

This feature has no annotations

CG06_land_8_20_14_3.00_150_scaffold_538_c_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10753..11181
DNA (429bp) protein (143aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11282..11668
DNA (387bp) protein (129aa)
Ribonuclease P protein component 2 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ribonuclease P protein component 2
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11694..12428
DNA (735bp) protein (245aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


12441..13166
DNA (726bp) protein (242aa)
RNA-associated protein; K14574 ribosome maturation protein SDO1 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosome maturation protein SDO1-like protein
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13183..13893
DNA (711bp) protein (237aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative exosome complex RNA-binding protein 1
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13894..14604
DNA (711bp) protein (237aa)
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
exosome complex exonuclease Rrp41
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14597..15373
DNA (777bp) protein (259aa)
Ribosomal RNA-processing protein RRP42 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal RNA-processing protein RRP42
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15383..15613
DNA (231bp) protein (77aa)
UPI000021CFC7 related cluster bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15778..16245
DNA (468bp) protein (156aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

16301..16810
DNA (510bp) protein (170aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

16872..18302
DNA (1431bp) protein (477aa)
Drug resistance transporter, Bcr/CflA subfamily bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

18329..18823
DNA (495bp) protein (165aa)
seg bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

18869..20470
DNA (1602bp) protein (534aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

20544..21596
DNA (1053bp) protein (351aa)
NAD-dependent epimerase/dehydratase bin=GWF2_OP3_38_59 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
nucleoside-diphosphate-sugar epimerase
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

21754..23112
DNA (1359bp) protein (453aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
sulfatase
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_538_c_29
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

23132..23710
DNA (579bp) protein (193aa)
Glycosyltransferase (Fragment) bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
Displaying 29 items

View Taxonomy