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CG06_land_8_20_14_3.00_150_scaffold_2584_c

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG06_land_8_20_14_3.00_150_scaffold_2584_c_1
CG_Woesearch_01, Woesearchaeota, Archaea

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16..723
DNA (708bp) protein (236aa)
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Woesearch_01
CG06_land_8_20_14_3.00_150_scaffold_2584_c_2
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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786..2957
DNA (2172bp) protein (724aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
Methionine--tRNA ligase Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R3M1_SPISS
CG06_land_8_20_14_3.00_150_scaffold_2584_c_3
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(2975..3112)
DNA (138bp) protein (46aa)
Tax=CG_Woesearch_03
CG06_land_8_20_14_3.00_150_scaffold_2584_c_4
CG_Woesearch_01, Woesearchaeota, Archaea

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3181..5295
DNA (2115bp) protein (705aa)
Tax=CG_Woesearch_01
CG06_land_8_20_14_3.00_150_scaffold_2584_c_5
CG_Woesearch_02, Woesearchaeota, Archaea

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5292..8642
DNA (3351bp) protein (1117aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_2584_c_6
CG_Woesearch_02, Woesearchaeota, Archaea

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8694..10895
DNA (2202bp) protein (734aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_2584_c_7
CG_Woesearch_02, Woesearchaeota, Archaea

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10897..11709
DNA (813bp) protein (271aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_2584_c_8
CG_Woesearch_02, Woesearchaeota, Archaea

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11765..12469
DNA (705bp) protein (235aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_2584_c_9
CG_Woesearch_02, Woesearchaeota, Archaea

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12543..13640
DNA (1098bp) protein (366aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_2584_c_10
CG_Woesearch_03, Woesearchaeota, Archaea

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13637..17662
DNA (4026bp) protein (1342aa)
Tax=CG_Woesearch_03
CG06_land_8_20_14_3.00_150_scaffold_2584_c_11
CG_Woesearch_02, Woesearchaeota, Archaea

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17662..18630
DNA (969bp) protein (323aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_2584_c_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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18671..19201
DNA (531bp) protein (177aa)
ZPR1-like zinc finger protein; K06874 zinc finger protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ZPR1-like protein zinc finger protein
Tax=RBG_13_Woesearchaeota_36_6_curated
CG06_land_8_20_14_3.00_150_scaffold_2584_c_13

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19265..20056
DNA (792bp) protein (264aa)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; species="Archaea.;" source="archaeon GW2011_AR15.;"
5'-methylthioadenosine phosphorylase II (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
CG06_land_8_20_14_3.00_150_scaffold_2584_c_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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20112..20636
DNA (525bp) protein (175aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F706F
adenine phosphoribosyltransferase
Tax=RBG_13_Woesearchaeota_36_6_curated
CG06_land_8_20_14_3.00_150_scaffold_2584_c_15
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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20706..21254
DNA (549bp) protein (183aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360DDAD
DNA polymerase beta domain protein region {ECO:0000313|EMBL:EHQ34452.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
hypothetical protein
CG06_land_8_20_14_3.00_150_scaffold_2584_c_16
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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21229..21708
DNA (480bp) protein (160aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003609C27
HEPN domain protein {ECO:0000313|EMBL:EHQ34453.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
hypothetical protein
CG06_land_8_20_14_3.00_150_scaffold_2584_c_17
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(21837..22415)
DNA (579bp) protein (193aa)
hypothetical protein
Tax=RBG_16_Spirochaetes_49_21_curated
CG06_land_8_20_14_3.00_150_scaffold_2584_c_18
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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22571..23338
DNA (768bp) protein (256aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
Uncharacterized protein Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7VD69_9FUSO
RNA-binding S4 domain-containing protein
CG06_land_8_20_14_3.00_150_scaffold_2584_c_19
unknown

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23356..23568
DNA (213bp) protein (71aa)

This feature has no annotations

CG06_land_8_20_14_3.00_150_scaffold_2584_c_20
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(23552..24304)
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=Rhodopirellula europaea 6C RepID=M2AWZ1_9PLAN
merozoite surface protein 3b
Uncharacterized protein {ECO:0000313|EMBL:EKK00461.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
Displaying 20 items

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