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CG06_land_8_20_14_3.00_150_scaffold_3161_c

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG06_land_8_20_14_3.00_150_scaffold_3161_c_1
CG_Woesearch_02, Woesearchaeota, Archaea

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3..437
DNA (435bp) protein (145aa)
Putative geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (GGPS) Tax=uncultured archaeon RepID=D1JFP7_9ARCH
geranylgeranyl pyrophosphate synthase
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_2
CG_Woesearch_02, Woesearchaeota, Archaea

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526..1215
DNA (690bp) protein (230aa)
ispD2; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKV6_CLOSH
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_3
CG_Woesearch_02, Woesearchaeota, Archaea

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1208..1687
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Beggiatoa alba B18LD RepID=I3CDW1_9GAMM
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_4
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1692..2564
DNA (873bp) protein (291aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TCI3_9CLOT
CG06_land_8_20_14_3.00_150_scaffold_3161_c_5
unknown

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2636..3388
DNA (753bp) protein (251aa)

This feature has no annotations

CG06_land_8_20_14_3.00_150_scaffold_3161_c_6
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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3482..4291
DNA (810bp) protein (270aa)
Hydroxymethylbutenyl pyrophosphate reductase Tax=Thermincola potens (strain JR) RepID=D5XFM1_THEPJ
hydroxymethylbutenyl pyrophosphate reductase
Tax=BJP_08E140C01_Clostridiales_46_19
CG06_land_8_20_14_3.00_150_scaffold_3161_c_7
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

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4292..4672
DNA (381bp) protein (127aa)
Tax=BJP_IG2103_TM7_39_1400
CG06_land_8_20_14_3.00_150_scaffold_3161_c_8

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comp(4720..5418)
DNA (699bp) protein (233aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; species="Archaea.;" source="archaeon GW2011_AR3.;"
UDP pyrophosphate synthase
CG06_land_8_20_14_3.00_150_scaffold_3161_c_9
unknown

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comp(5473..6825)
DNA (1353bp) protein (451aa)

This feature has no annotations

CG06_land_8_20_14_3.00_150_scaffold_3161_c_10
unknown

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comp(6827..7276)
DNA (450bp) protein (150aa)

This feature has no annotations

CG06_land_8_20_14_3.00_150_scaffold_3161_c_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7287..8237)
DNA (951bp) protein (317aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8234..9325)
DNA (1092bp) protein (364aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9349..9585)
DNA (237bp) protein (79aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_14
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9585..10091)
DNA (507bp) protein (169aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10218..10874)
DNA (657bp) protein (219aa)
Methyltransferase type 11 Tax=mine drainage metagenome RepID=T0Y6Z1_9ZZZZ
transcriptional regulator, MerR family
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_16
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10955..11764)
DNA (810bp) protein (270aa)
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_17
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(11766..12986)
DNA (1221bp) protein (407aa)
Phosphonopyruvate decarboxylase protein bin=GWA2_OP3_52_12 species=Streptomyces rimosus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
3-phosphonopyruvate decarboxylase
Tax=CG_Woesearch_02
CG06_land_8_20_14_3.00_150_scaffold_3161_c_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12970..14088)
DNA (1119bp) protein (373aa)
Radical SAM domain protein Tax=Clostridium perfringens RepID=B1BUL0_CLOPF
Radical SAM domain protein {ECO:0000313|EMBL:EDT14614.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
CG06_land_8_20_14_3.00_150_scaffold_3161_c_19
AR18, Woesearchaeaota, DPANN, Archaea

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14330..14617
DNA (288bp) protein (96aa)
hypothetical protein; K09728 hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
CG06_land_8_20_14_3.00_150_scaffold_3161_c_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(14597..15217)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MNQ7_CRYCD
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
CG06_land_8_20_14_3.00_150_scaffold_3161_c_21

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comp(15201..15716)
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM20124.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CG06_land_8_20_14_3.00_150_scaffold_3161_c_22
AR15, Woesearchaeaota, DPANN, Archaea

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comp(15728..16411)
DNA (684bp) protein (228aa)
Probable tRNA pseudouridine synthase B bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
H/ACA RNA-protein complex component Cbf5p
Tax=AR15
Displaying 22 items

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