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CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_1
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..407)
DNA (405bp) protein (135aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:273.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase Tax=Clostridium sp. CAG:273 RepID=R7L7R7_9CLOT
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_2
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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591..2510
DNA (1920bp) protein (640aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
DNA gyrase subunit B Tax=Thermoanaerobacter RepID=I8R479_9THEO
gyrB; protein GyrB
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_3

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2576..3952
DNA (1377bp) protein (459aa)
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; species="Archaea.;" source="archaeon GW2011_AR16.;"
Signal recognition particle 54 kDa protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SRP54-type protein, GTPase protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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3954..4514
DNA (561bp) protein (187aa)
YdeN-like protein; K07002 bin=Nanosalinarum tax=Nanosalinarum
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_5
unknown

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comp(4511..4969)
DNA (459bp) protein (153aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(4975..5979)
DNA (1005bp) protein (335aa)
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative deoxyhypusine synthase (EC:2.5.1.46)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_7
unknown

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comp(6005..6226)
DNA (222bp) protein (74aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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6356..7054
DNA (699bp) protein (233aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase Tax=sediment metagenome RepID=D9PEW0_9ZZZZ
Tax=RBG_13_Pacearchaeota_36_9_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_9
Thermosipho melanesiensis, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

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7020..7493
DNA (474bp) protein (158aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26)
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:ABR31036.1}; EC=5.3.1.26 {ECO:0000313|EMBL:ABR31036.1};; species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho melanesiensis (strain BI429 / DSM 12029).;"
Sugar-phosphate isomerase, RpiB/LacA/LacB family Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LM85_THEM4
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_10

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comp(7490..8761)
DNA (1272bp) protein (424aa)
enolase-like; K01689 enolase [EC:4.2.1.11] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Archaea.;" source="archaeon GW2011_AR4.;"
Enolase
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_11
AR15, Woesearchaeaota, DPANN, Archaea

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comp(8827..9180)
DNA (354bp) protein (118aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9243..10010)
DNA (768bp) protein (256aa)
hypothetical protein; K07159 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_13

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comp(10003..10161)
DNA (159bp) protein (53aa)
UPI000021D016 related cluster bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; species="Archaea.;" source="archaeon GW2011_AR15.;"
H/ACA RNA-protein complex component Nop10p
CG10_big_fil_rev_8_21_14_0.10_scaffold_6500_c_14
AR4, Woesearchaeaota, DPANN, Archaea

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comp(10165..10794)
DNA (630bp) protein (210aa)
translation initiation factor 2, alpha subunit; K03237 translation initiation factor 2 subunit 1 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Translation initiation factor 2 subunit alpha
Tax=AR4
Displaying 14 items

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