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CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_1
unknown

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53..541
DNA (489bp) protein (163aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_2

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734..1039
DNA (306bp) protein (102aa)
50S ribosomal protein L7Ae bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L7Ae {ECO:0000313|EMBL:AJF62107.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
50S ribosomal protein L7Ae
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_3

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1085..1336
DNA (252bp) protein (84aa)
30S ribosomal protein S28e bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; species="Archaea.;" source="archaeon GW2011_AR15.;"
30S ribosomal protein S28e
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_4
CG_Woesearch_02, Woesearchaeota, Archaea

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1350..1541
DNA (192bp) protein (64aa)
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
large subunit ribosomal protein L24e
Tax=CG_Woesearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_5
GWC1_OD1_35_31, Campbellbacteria, Parcubacteria, Bacteria

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1697..2275
DNA (579bp) protein (193aa)
nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] bin=OD1_GWC2_34_28 species=Pyrobaculum aerophilum genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Nucleoside diphosphate kinase {ECO:0000313|EMBL:KKP76517.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWC1_35_31.;"
nucleoside diphosphate kinase
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_6

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2968..5160
DNA (2193bp) protein (731aa)
fusA; elongation factor EF-2; K03234 elongation factor 2 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Elongation factor 2
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_7

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5309..6595
DNA (1287bp) protein (429aa)
translation elongation factor 1a (ef-1a/ef-tu) (EC:2.7.7.4); K03231 elongation factor 1-alpha bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; species="Archaea.;" source="archaeon GW2011_AR4.;"
Elongation factor 1-alpha
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_8

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6677..6988
DNA (312bp) protein (104aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; species="Archaea.;" source="archaeon GW2011_AR16.;"
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rps10p; 30S ribosomal protein S10P
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_9

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comp(7050..7841)
DNA (792bp) protein (264aa)
site-specific recombinase XerD bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Site-specific recombinase XerD {ECO:0000313|EMBL:KHO46655.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_10

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comp(7859..8188)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TE55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO52418.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_11

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comp(8169..8447)
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52417.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_12
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

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8753..9064
DNA (312bp) protein (104aa)
transmembrane_regions 68..90 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Lycopene cyclase
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_13
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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9216..9428
DNA (213bp) protein (71aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037DF6D8
Tax=RBG_16_Micrarchaeota_49_10_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_11797_c_14
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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9852..10361
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Methanolinea tarda NOBI-1 RepID=G6FIX8_9EURY
hypothetical protein
Tax=CG_Delta_01
Displaying 14 items

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