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Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_1
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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172..387
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ETP8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA05709.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_2
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

399..1133
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8V8_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:AJW70861.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
hypothetical protein rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_3
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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1195..1524
DNA (330bp) protein (110aa)
Transcriptional regulator n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCG4_9ARCH
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFS82787.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_4

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1532..1873
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1D7_NITMS
Transcriptional regulator protein {ECO:0000313|EMBL:KFM20058.1}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_5
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(2252..2545)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CX01_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP93803.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_6
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

2678..3184
DNA (507bp) protein (169aa)
Putative copper-binding protein, plastocyanin/azurin family protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWV2_9ARCH
Putative copper-binding protein, plastocyanin/azurin family protein {ECO:0000313|EMBL:EGP93754.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_7
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3174..4199)
DNA (1026bp) protein (342aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:0000256|HAMAP-Rule:MF_01163}; EC=6.3.4.23 {ECO:0000256|HAMAP-Rule:MF_01163};; 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase {ECO:0000256|HAMAP-Rule:MF_01163}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase (EC:6.3.4.-)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7E2_9ARCH
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_8
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(4227..4436)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJ68_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG42596.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_9

Not on your lists


4810..6120
DNA (1311bp) protein (437aa)
Aspartate--tRNA ligase protein {ECO:0000313|EMBL:KFM20050.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KFM20050.1};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
Aspartyl-tRNA synthetase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6Y3_9ARCH
aspartyl-tRNA synthetase
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_10

Not on your lists

6127..6396
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8U3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KFM20049.1}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_11
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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6427..7839
DNA (1413bp) protein (471aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120, ECO:0000313|EMBL:AJM92541.1}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120, ECO:0000313|EMBL:AJM92541.1};; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B7D5_9ARCH rbh
glutamyl-tRNA(Gln) amidotransferase subunit A rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_12

Not on your lists

7836..9239
DNA (1404bp) protein (468aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1502289 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-B03.;"
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWU6_9ARCH rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_13
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

9242..9505
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJ62_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG42590.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_14
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

9611..11473
DNA (1863bp) protein (621aa)
AMP-dependent synthetase and ligase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWU4_9ARCH rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EGP93746.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
AMP-dependent synthetase and ligase rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_15
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

11544..12902
DNA (1359bp) protein (453aa)
class I/II aminotransferase; K00812 aspartate aminotransferase [EC:2.6.1.1] rbh
Aminotransferase class I and II n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWB7_9ARCH
Aminotransferase class I and II {ECO:0000313|EMBL:EGP93569.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_16
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

Not on your lists

comp(12916..14004)
DNA (1089bp) protein (363aa)
Sensor protein SrrB {ECO:0000313|EMBL:KFM17950.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KFM17950.1};; TaxID=1503183 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
PAS/PAC sensor signal transduction histidine kinase n=3 Tax=Nitrosopumilaceae RepID=K0B5Y4_9ARCH rbh
PAS/PAC sensor signal transduction histidine kinase rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_17
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(14015..14407)
DNA (393bp) protein (131aa)
Protein MprA n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B436_9ARCH
protein MprA
Protein MprA {ECO:0000313|EMBL:AFS80858.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_18

Not on your lists

comp(14404..15354)
DNA (951bp) protein (317aa)
Transcriptional regulator TrmB n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6X1_9ARCH rbh
Transcriptional regulator TrmB protein {ECO:0000313|EMBL:KFM16271.1}; TaxID=1502291 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-D11.;"
transcriptional regulator TrmB rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_19

Not on your lists

comp(15427..16122)
DNA (696bp) protein (232aa)
Preflagellin peptidase protein {ECO:0000313|EMBL:KFM16270.1}; EC=3.4.23.52 {ECO:0000313|EMBL:KFM16270.1};; TaxID=1502291 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-D11.;"
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8S7_9ARCH rbh
hypothetical protein rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_20
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

16155..16514
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Nitrosopumilaceae RepID=K0B7C3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS80855.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_980_21
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(16494..18734)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5X4_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:AFS80854.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
hypothetical protein rbh
Displaying 21 items

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