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Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_1
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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67..1347
DNA (1281bp) protein (427aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
glutamate-1-semialdehyde-2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=GSA_NITMS
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_2
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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1344..2279
DNA (936bp) protein (312aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
Probable porphobilinogen deaminase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B321_9ARCH
porphobilinogen deaminase
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_3
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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2243..3016
DNA (774bp) protein (258aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B4R9_9ARCH
uroporphyrin-III C-methyltransferase
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AJW71375.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_4
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3018..3818
DNA (801bp) protein (267aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB43_9ARCH
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:AJW71374.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
uroporphyrinogen III synthase HEM4
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_5

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3932..6034
DNA (2103bp) protein (701aa)
peptidase n=1 Tax=Nitrosopumilus RepID=UPI00037EA1FC rbh
Peptidase m36 family protein {ECO:0000313|EMBL:KFM20398.1}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
peptidase, m36 (fungalysin) family protein rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_6
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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6143..7543
DNA (1401bp) protein (467aa)
FeS assembly protein SufB n=2 Tax=Nitrosopumilaceae RepID=K0B7I6_9ARCH rbh
FeS assembly protein SufB rbh
FeS assembly protein SufB {ECO:0000313|EMBL:AFS80406.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_7
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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7568..8968
DNA (1401bp) protein (467aa)
FeS assembly protein SufD n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KHU3_9ARCH rbh
FeS assembly protein SufD {ECO:0000313|EMBL:EGG43078.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
FeS assembly protein SufD
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_8
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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8965..9282
DNA (318bp) protein (106aa)
Rieske [2Fe-2S] domain protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E695_9ARCH
Rieske [2Fe-2S] domain protein {ECO:0000313|EMBL:EPA04986.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
dioxygenase ferredoxin protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_9

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9286..10530
DNA (1245bp) protein (415aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
Cysteine desulfurase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B4S2_9ARCH
SufS subfamily cysteine desulfurase
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_2339_10
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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10527..10766
DNA (240bp) protein (80aa)
NifU family SUF system FeS assembly protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B677_9ARCH
NifU family SUF system FeS assembly protein
NifU family SUF system FeS assembly protein {ECO:0000313|EMBL:AFS80410.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
Displaying 10 items

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