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cg1_0.2A_scaffold_100

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2A_scaffold_100_1
unknown

Not on your lists

556..759
DNA (204bp) protein (68aa)

This feature has no annotations

cg1_0.2A_scaffold_100_2
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(1269..1907)
DNA (639bp) protein (213aa)
hypothetical protein Tax=CG_CPR12_01
hypothetical protein id=5803644 bin=OD1_GWC2_34_28 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg1_0.2A_scaffold_100_trna_3
unknown

Not on your lists

comp(1960..2031)
DNA (72bp)
transferRNA
cg1_0.2A_scaffold_100_trna_2
unknown

Not on your lists

comp(2038..2111)
DNA (74bp)
transferRNA
cg1_0.2A_scaffold_100_3
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(2217..2513)
DNA (297bp) protein (99aa)
hup; DNA-binding protein HU; K03530 DNA-binding protein HU-beta Tax=CG_CPR12_01
hypothetical protein id=5801620 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hup; DNA-binding protein HU
cg1_0.2A_scaffold_100_4
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(2640..3434)
DNA (795bp) protein (265aa)
Metallophosphoesterase n=1 Tax=Staphylococcus sp. HGB0015 RepID=S2XK50_9STAP
hypothetical protein; K09769 hypothetical protein Tax=CG_CPR12_01
phosphoesterase
cg1_0.2A_scaffold_100_5
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(3514..5034)
DNA (1521bp) protein (507aa)
HDIG/KH domain-containing protein; K06950 uncharacterized protein Tax=CG_CPR12_01
drm:Dred_1919 phosphodiesterase; K06950 id=120394 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
HDIG/KH domain-containing protein
cg1_0.2A_scaffold_100_6
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(5470..6465)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BGM7_9BACT
MgpA protein; K06881 phosphoesterase RecJ domain-containing protein Tax=CG_CPR12_01
MgpA protein
cg1_0.2A_scaffold_100_7
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(6466..6792)
DNA (327bp) protein (109aa)
Ribosome-binding factor A n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXK3_9BACT
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=CG_CPR12_01
cg1_0.2A_scaffold_100_8
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(6852..8861)
DNA (2010bp) protein (670aa)
Translation initiation factor IF-2 n=1 Tax=uncultured bacterium RepID=K1Z673_9BACT rbh
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=CG_CPR12_01
infB; translation initiation factor IF-2
cg1_0.2A_scaffold_100_9
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

8945..9676
DNA (732bp) protein (244aa)
tRNA pseudouridine 55 synthase; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=CG_CPR12_01
tRNA pseudouridine synthase B id=1816798 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
tRNA pseudouridine 55 synthase
cg1_0.2A_scaffold_100_10
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

9746..11044
DNA (1299bp) protein (433aa)
aspartate transaminase Tax=CG_CPR12_01
Aminotransferase class I and II id=4093197 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
aspartate transaminase
cg1_0.2A_scaffold_100_11
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists


11204..11494
DNA (291bp) protein (97aa)
rpsT; 30S ribosomal protein S20 Tax=CG_CPR12_01
30S ribosomal protein S20 id=1981112 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S20
cg1_0.2A_scaffold_100_12
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(11436..12467)
DNA (1032bp) protein (344aa)
DNA polymerase III, delta subunit n=1 Tax=uncultured bacterium RepID=K1ZGE1_9BACT
DNA polymerase III, delta subunit Tax=CG_CPR12_01
cg1_0.2A_scaffold_100_13
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(12563..15307)
DNA (2745bp) protein (915aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=CG_CPR12_01
hypothetical protein id=5801487 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
DNA polymerase I
cg1_0.2A_scaffold_100_14
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(15676..16959)
DNA (1284bp) protein (428aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=CG_CPR12_01
Pyridine nucleotide-disulfide oxidoreductase family protein id=2824586 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
cg1_0.2A_scaffold_100_15
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(17016..17816)
DNA (801bp) protein (267aa)
glk; glucose kinase; K00845 glucokinase [EC:2.7.1.2] id=43361 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
glucokinase Tax=CG_CPR12_01
glucokinase
cg1_0.2A_scaffold_100_16
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(17852..19069)
DNA (1218bp) protein (406aa)
Tax=CG_CPR12_01
cg1_0.2A_scaffold_100_trna_1
unknown

Not on your lists

comp(19151..19223)
DNA (73bp)
transferRNA
cg1_0.2A_scaffold_100_17
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(19379..19861)
DNA (483bp) protein (161aa)
hypothetical protein Tax=CG_CPR12_01
Putative uncharacterized protein id=5801489 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
cg1_0.2A_scaffold_100_18
unknown

Not on your lists

19873..20268
DNA (396bp) protein (132aa)

This feature has no annotations

cg1_0.2A_scaffold_100_19
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(20098..20877)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000375F4C7
CheA signal transduction histidine kinase Tax=CG_CPR12_01
CheA signal transduction histidine kinase
cg1_0.2A_scaffold_100_20
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(20896..22725)
DNA (1830bp) protein (610aa)
two-component sensor kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3] Tax=CG_CPR12_01
Multi-sensor signal transduction histidine kinase id=1743941 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
two-component sensor kinase
cg1_0.2A_scaffold_100_21
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(22741..22977)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000377B1C0
hypothetical protein Tax=CG_CPR12_01
cg1_0.2A_scaffold_100_22
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(22958..23329)
DNA (372bp) protein (124aa)
Tax=CG_CPR12_01
cg1_0.2A_scaffold_100_23
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(23360..24181)
DNA (822bp) protein (274aa)
hypothetical protein Tax=CG_CPR12_01
Putative uncharacterized protein id=3012698 bin=GWC1_OD1_38_17 species=uncultured marine bacterium 580 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
hypothetical protein
Displaying 26 items

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