ggKbase home page

cg1_0.2A_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 147 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2A_scaffold_0_1
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


183..335
DNA (153bp) protein (51aa)
50S ribosomal protein L33 n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00036A35CC
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=CG_Mariprof_05
50S ribosomal protein L33
cg1_0.2A_scaffold_0_trna_1
unknown

Not on your lists

349..421
DNA (73bp)
transferRNA
cg1_0.2A_scaffold_0_2
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

459..647
DNA (189bp) protein (63aa)
Protein translocase subunit SecE n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVX3_9PROT
Preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=CG_Mariprof_05
preprotein translocase subunit SecE
cg1_0.2A_scaffold_0_3
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

648..1178
DNA (531bp) protein (177aa)
transcription antitermination protein NusG n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI000375398C rbh
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=CG_Mariprof_05
NusG antitermination factor
cg1_0.2A_scaffold_0_4
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1294..1722
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI0003615F8C
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Mariprof_05
50S ribosomal protein L11
cg1_0.2A_scaffold_0_5
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1726..2415
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00035C9826
rplA; 50S ribosomal protein L1 Tax=CG_Mariprof_05
50S ribosomal protein L1
cg1_0.2A_scaffold_0_6
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2595..3110
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037A14F9
50S ribosomal protein L10p; K02864 large subunit ribosomal protein L10 Tax=CG_Mariprof_05
50S ribosomal protein L10p
cg1_0.2A_scaffold_0_7
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3161..3541
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVW8_9PROT
rplL; putative 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=CG_Mariprof_05
rplL; putative 50S ribosomal protein L7/L12
cg1_0.2A_scaffold_0_8
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3685..7788
DNA (4104bp) protein (1368aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_Mariprof_05
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000362D684 rbh
cg1_0.2A_scaffold_0_9
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7790..11932
DNA (4143bp) protein (1381aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_Mariprof_05
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037A3051 rbh
DNA-directed RNA polymerase subunit beta'
cg1_0.2A_scaffold_0_10
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12012..13049
DNA (1038bp) protein (346aa)
rod shape-determining protein Mbl n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI0003686074 rbh
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Mariprof_05
rod shape-determining protein MreB
cg1_0.2A_scaffold_0_11
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13046..13837
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000371220A
rod shape-determining protein Tax=CG_Mariprof_05
Cell shape-determining protein MreC
cg1_0.2A_scaffold_0_12
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14244..16019
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00036D7318
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=CG_Mariprof_05
mrdA; penicillin-binding protein 2
cg1_0.2A_scaffold_0_13
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16019..17122
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00036462AF rbh
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=CG_Mariprof_05
rod shape-determining protein RodA
cg1_0.2A_scaffold_0_14
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17126..18286)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037DC11C rbh
major facilitator superfamily protein; K08227 MFS transporter, LPLT family, lysophospholipid transporter Tax=CG_Mariprof_05
major facilitator superfamily protein
cg1_0.2A_scaffold_0_15
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18293..20458)
DNA (2166bp) protein (722aa)
aas; 2-acylglycerophosphoethanolamine acyltransferase; K05939 acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] T
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000369FEA7 rbh
aas; 2-acylglycerophosphoethanolamine acyltransferase
cg1_0.2A_scaffold_0_16
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20787..22067
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000376B1C2
UDP-N-acetyl-D-mannosaminuronate dehydrogenase Tax=CG_Mariprof_05
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
cg1_0.2A_scaffold_0_17
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22082..23200
DNA (1119bp) protein (373aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=CG_Mariprof_05
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00036338DE rbh
cg1_0.2A_scaffold_0_18
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23234..24124
DNA (891bp) protein (297aa)
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=CG_Mariprof_05
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000376242C rbh
NAD-dependent epimerase/dehydratase
cg1_0.2A_scaffold_0_19
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24117..25286
DNA (1170bp) protein (390aa)
pyridoxamine 5-phosphate oxidase n=1 Tax=Amphritea japonica RepID=UPI000377652D rbh
polysaccharide biosynthesis protein Tax=CG_Mariprof_05
polysaccharide biosynthesis protein
cg1_0.2A_scaffold_0_20
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25353..25901
DNA (549bp) protein (183aa)
Chloramphenicol acetyltransferase n=1 Tax=Pseudoalteromonas haloplanktis ANT/505 RepID=F3BFN9_PSEHA
hexapeptide repeat-containing transferase Tax=CG_Mariprof_05
Hypothetical protein
cg1_0.2A_scaffold_0_21
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25888..26904
DNA (1017bp) protein (339aa)
Tlr2314 protein n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DGK3_THEEB
hypothetical protein Tax=CG_Mariprof_05
hypothetical protein
cg1_0.2A_scaffold_0_22
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26891..27934
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DSS1_PSEFL
fucosyl transferase Tax=CG_Mariprof_05
fucosyl transferase
cg1_0.2A_scaffold_0_23
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27945..29378
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DRE4_PSEFL rbh
polysaccharide biosynthesis protein Tax=CG_Mariprof_05
polysaccharide biosynthesis protein
cg1_0.2A_scaffold_0_24
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29371..30255
DNA (885bp) protein (295aa)
Glycosyl transferase family 11 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ93_SIDLE rbh
glycosyl transferase family 11 Tax=CG_Mariprof_05
glycosyl transferase family 11
cg1_0.2A_scaffold_0_25
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30265..31200
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=unclassified Zetaproteobacteria RepID=UPI00035FB9F3 rbh
NAD-dependent epimerase/dehydratase Tax=CG_Mariprof_05
NAD-dependent epimerase/dehydratase
cg1_0.2A_scaffold_0_26
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31197..32150
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=unclassified Zetaproteobacteria RepID=UPI0003636AF6
Glycosyl transferase, group 2 family protein Tax=CG_Mariprof_05
glycosyl transferase, group 2 family protein
cg1_0.2A_scaffold_0_27
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32147..33508
DNA (1362bp) protein (454aa)
Tax=CG_Mariprof_05
cg1_0.2A_scaffold_0_28
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33448..34314
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037C0EAE
glycosyl transferase family 2 Tax=CG_Mariprof_05
glycosyl transferase family 2
cg1_0.2A_scaffold_0_29
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34314..35483
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Vibrio ordalii RepID=UPI000382730A
group 1 glycosyl transferase Tax=CG_Mariprof_05
group 1 glycosyl transferase
Displaying items 1-30 of 147 in total

View Taxonomy