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cg1_0.2A_scaffold_566

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2A_scaffold_566_1
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

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21..938
DNA (918bp) protein (306aa)
selB; selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=GWF2_Nitrospirae_44_13_curated
Selenocysteine-specific translation elongation factor id=3240555 bin=GWF2_Nitrospirae_44_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
selB; selenocysteine-specific translation elongation factor
cg1_0.2A_scaffold_566_2
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(960..2042)
DNA (1083bp) protein (361aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=GWF2_Nitrospirae_44_13_curated
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase id=3240553 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
cg1_0.2A_scaffold_566_3
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

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comp(2104..2613)
DNA (510bp) protein (170aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=GWF2_Nitrospirae_44_13_curated
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase id=3240552 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
cg1_0.2A_scaffold_566_4
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

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comp(2631..2774)
DNA (144bp) protein (48aa)
S23 ribosomal protein Tax=RBG_16_RIF03_38_11_curated
cg1_0.2A_scaffold_566_5
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(2858..4186)
DNA (1329bp) protein (443aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RBG_16_Nitrospirae_43_8_curated
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase id=3240551 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
cg1_0.2A_scaffold_566_6
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

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comp(4201..6498)
DNA (2298bp) protein (766aa)
Type IV pilus secretin PilQ id=3240550 bin=GWF2_Nitrospirae_44_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ Tax=GWF2_Nitrospirae_44_13_curated
type IV pilus secretin PilQ
cg1_0.2A_scaffold_566_7
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

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comp(6495..7076)
DNA (582bp) protein (194aa)
Putative uncharacterized protein id=3240549 bin=GWF2_Nitrospirae_44_13 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein; K02665 type IV pilus assembly protein PilP Tax=GWF2_Nitrospirae_44_13_curated
hypothetical protein
cg1_0.2A_scaffold_566_8
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(7073..7666)
DNA (594bp) protein (198aa)
Related to fimbrial assembly protein PilO id=3240548 bin=GWF2_Nitrospirae_44_13 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
fimbrial assembly protein PilO; K02664 type IV pilus assembly protein PilO Tax=GWF2_Nitrospirae_44_13_curated
putative type IV pilus biogenesis protein PilO
cg1_0.2A_scaffold_566_9
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(7668..8210)
DNA (543bp) protein (181aa)
Putative Type IV pilus biogenesis protein PilN id=3240547 bin=GWF2_Nitrospirae_44_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
putative type IV pilus biogenesis protein PilN; K02663 type IV pilus assembly protein PilN Tax=GWF2_Nitrospirae_44_13_curated
putative type IV pilus biogenesis protein PilN
cg1_0.2A_scaffold_566_10
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(8207..9238)
DNA (1032bp) protein (344aa)
Type IV pilus biogenesis protein PilM id=3240449 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
pilM; type IV pilus biogenesis protein PilM; K02662 type IV pilus assembly protein PilM Tax=GWF2_Nitrospirae_44_13_curated
pilM; type IV pilus assembly protein PilM
cg1_0.2A_scaffold_566_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

9467..10363
DNA (897bp) protein (299aa)
hindIIIR; type II restriction endonuclease; K01155 type II restriction enzyme [EC:3.1.21.4] Tax=CG_Nitrosp_01
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2BA18_TREDN rbh
hindIII restriction endonuclease
Displaying 11 items

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