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cg1_0.2A_scaffold_303

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2A_scaffold_303_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(584..802)
DNA (219bp) protein (73aa)
Marine sediment metagenome DNA, contig: S03H2_S13347 Tax=CG_Omnitr_03
cg1_0.2A_scaffold_303_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(821..1900)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AAS6_THEID rbh
hypothetical protein Tax=CG_Omnitr_03
hypothetical protein
cg1_0.2A_scaffold_303_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

2072..2254
DNA (183bp) protein (61aa)
Tax=CG_Omnitr_03
cg1_0.2A_scaffold_303_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

2251..2985
DNA (735bp) protein (245aa)
Putative recombinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH74_9BACT
recombinase Tax=CG_Omnitr_03
recombinase
cg1_0.2A_scaffold_303_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

3019..3951
DNA (933bp) protein (311aa)
resolvase Tax=CG_Omnitr_03
Putative recombinase (Fragment) id=2052563 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
resolvase
cg1_0.2A_scaffold_303_trna_2
unknown

Not on your lists

comp(3925..4011)
DNA (87bp)
transferRNA
cg1_0.2A_scaffold_303_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(4077..4445)
DNA (369bp) protein (123aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QSR2_ACEAZ
hypothetical protein; K07461 putative endonuclease Tax=CG_Omnitr_03
excinuclease ABC C subunit domain-containing protein
cg1_0.2A_scaffold_303_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(4566..5228)
DNA (663bp) protein (221aa)
hypothetical protein Tax=CG_Omnitr_03
Putative uncharacterized protein id=4894946 bin=GWC2_Nitrospirae-rel_56_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
cg1_0.2A_scaffold_303_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(5233..6498)
DNA (1266bp) protein (422aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=CG_Omnitr_03
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase id=4123798 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8 rbh
cg1_0.2A_scaffold_303_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(6503..9508)
DNA (3006bp) protein (1002aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=CG_Omnitr_03
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5241347 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
hypothetical protein
cg1_0.2A_scaffold_303_trna_1
unknown

Not on your lists

comp(9711..9782)
DNA (72bp)
transferRNA
cg1_0.2A_scaffold_303_10
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10050..10613)
DNA (564bp) protein (188aa)
ribosome recycling factor Tax=CG_Omnitr_03
Ribosome-recycling factor id=1791204 bin=GWB2_CP_45_9 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
ribosome recycling factor
cg1_0.2A_scaffold_303_11
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(10631..11368)
DNA (738bp) protein (246aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=CG_Omnitr_03
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YGE1_THEYD rbh
cg1_0.2A_scaffold_303_12
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(11361..11957)
DNA (597bp) protein (199aa)
Elongation factor Ts n=1 Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TFE1_CALOO
translation elongation factor Ts; K02357 elongation factor Ts Tax=CG_Omnitr_03
translation elongation factor Ts
cg1_0.2A_scaffold_303_13
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists


comp(11954..12838)
DNA (885bp) protein (295aa)
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Omnitr_03
30S ribosomal protein S2 id=4303020 bin=GWC2_OP3_44_8 species=Dialister succinatiphilus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 rbh
30S ribosomal protein S2
cg1_0.2A_scaffold_303_14
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

12923..13861
DNA (939bp) protein (313aa)
mviM; dehydrogenase Tax=CG_Omnitr_03
Predicted dehydrogenase id=2232231 bin=GWA2_OP3_53_43 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
mviM; dehydrogenase
cg1_0.2A_scaffold_303_15
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

13840..14973
DNA (1134bp) protein (378aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=CG_Omnitr_03
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase id=4188561 bin=GWF2_OP3_38_59 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159 rbh
cg1_0.2A_scaffold_303_16
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(14970..15773)
DNA (804bp) protein (268aa)
hypothetical protein; K09949 hypothetical protein Tax=CG_Omnitr_03
Putative uncharacterized protein id=4128226 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Displaying 18 items

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