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cg1_0.2A_scaffold_434

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2A_scaffold_434_1
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

74..1177
DNA (1104bp) protein (368aa)
Marine sediment metagenome DNA, contig: S03H2_S21899 Tax=CG_Omnitr_03
cg1_0.2A_scaffold_434_2
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

1162..1680
DNA (519bp) protein (173aa)
Tax=CG_Omnitr_03
cg1_0.2A_scaffold_434_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

1695..2171
DNA (477bp) protein (159aa)
Tax=CG_Omnitr_03
cg1_0.2A_scaffold_434_4
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

2245..3786
DNA (1542bp) protein (514aa)
type II and III secretion system secretin; K02453 general secretion pathway protein D Tax=CG_Omnitr_03
Putatively involved in type II secretion system id=4208772 bin=GWA2_OP3_53_43 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
type II and III secretion system secretin
cg1_0.2A_scaffold_434_5
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

3783..5486
DNA (1704bp) protein (568aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=CG_Omnitr_03
Type IV-A pilus assembly ATPase PilB id=4012487 bin=GWF2_OP3_43_52 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8 rbh
type II secretion system protein E (GspE)
cg1_0.2A_scaffold_434_6
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

5489..6712
DNA (1224bp) protein (408aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=CG_Omnitr_03
Type II secretion system protein id=4305238 bin=GWC2_OP3_44_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 rbh
pilC; type 4 fimbrial assembly protein pilC
cg1_0.2A_scaffold_434_7
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

6777..7139
DNA (363bp) protein (121aa)
pilA; fimbrial protein pilA Tax=CG_Omnitr_03
Type IV pilin PilA id=4219538 bin=GWC2_Proteo_65_14_Ab886 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
pilA; fimbrial protein pilA
cg1_0.2A_scaffold_434_8
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

7136..8011
DNA (876bp) protein (292aa)
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Tax=CG_Omnitr_03
Type II secretion system protein E id=2078701 bin=GWD2_RBX1-related_39_127 species=Caldicellulosiruptor owensensis genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
cg1_0.2A_scaffold_434_9
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

8117..9178
DNA (1062bp) protein (354aa)
Type IV pilus retraction protein PilT n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YDI3_DICT6 rbh
type IV pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=CG_Omnitr_03
type IV pilus retraction protein PilT
cg1_0.2A_scaffold_434_trna_1
unknown

Not on your lists

9255..9325
DNA (71bp)
transferRNA
Displaying 10 items

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