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cg1_0.2A_scaffold_77

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2A_scaffold_77_1
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(309..3617)
DNA (3309bp) protein (1103aa)
Tax=CG_Nomura_04
cg1_0.2A_scaffold_77_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3577..4020)
DNA (444bp) protein (148aa)
Tax=CG_Nomura_04
cg1_0.2A_scaffold_77_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(4039..5397)
DNA (1359bp) protein (453aa)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14) Tax=CG_Nomura_04
toc:Toce_0822 glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] id=96279 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
cg1_0.2A_scaffold_77_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5440..6132)
DNA (693bp) protein (231aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=CG_Nomura_04
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] id=5803416 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
1-acylglycerol-3-phosphate O-acyltransferase
cg1_0.2A_scaffold_77_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6139..7203)
DNA (1065bp) protein (355aa)
dnaJ; chaperone protein; K03686 molecular chaperone DnaJ Tax=CG_Nomura_04
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5803415 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
chaperone protein DnaJ
cg1_0.2A_scaffold_77_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7254..9170)
DNA (1917bp) protein (639aa)
chaperone protein DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK id=5803414 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Nomura_04
molecular chaperone DnaK
cg1_0.2A_scaffold_77_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9235..9828)
DNA (594bp) protein (198aa)
Protein GrpE n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYQ9_9BACT
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=CG_Nomura_04
GrpE protein HSP-70 cofactor
cg1_0.2A_scaffold_77_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(9907..10356)
DNA (450bp) protein (150aa)
SSU ribosomal protein S9P Tax=CG_Nomura_04
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5803411 bin=OD1_GWC2_34_28 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
SSU ribosomal protein S9P
cg1_0.2A_scaffold_77_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(10370..10723)
DNA (354bp) protein (118aa)
NCAS0H02390; hypothetical protein Tax=CG_Nomura_04
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5803410 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosomal protein L13, bacterial type
cg1_0.2A_scaffold_77_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(10730..11083)
DNA (354bp) protein (118aa)
50S ribosomal protein L17 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXB1_9BACT
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=CG_Nomura_04
rplQ; 50S ribosomal protein L17
cg1_0.2A_scaffold_77_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11080..12054)
DNA (975bp) protein (325aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=CG_Nomura_04
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=5803408 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
cg1_0.2A_scaffold_77_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(12162..12800)
DNA (639bp) protein (213aa)
30S ribosomal protein S4 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003737841
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Nomura_04
rpsD; 30S ribosomal protein S4
cg1_0.2A_scaffold_77_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(12816..13250)
DNA (435bp) protein (145aa)
rpsK; 30S ribosomal protein S11 Tax=CG_Nomura_04
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=5803406 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsK; 30S ribosomal protein S11
cg1_0.2A_scaffold_77_14
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(13270..13650)
DNA (381bp) protein (127aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Nomura_04
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=5803405 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S13
cg1_0.2A_scaffold_77_15
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13837..14046)
DNA (210bp) protein (70aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=CG_Nomura_04
Translation initiation factor IF-1 id=5227103 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
infA; translation initiation factor IF-1
cg1_0.2A_scaffold_77_16
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14112..15395)
DNA (1284bp) protein (428aa)
seg Tax=CG_Nomura_04
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg1_0.2A_scaffold_77_17
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15467..16657)
DNA (1191bp) protein (397aa)
id=5803402 Tax=CG_Nomura_04
id=5803402 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg1_0.2A_scaffold_77_18
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(16790..18565)
DNA (1776bp) protein (592aa)
alanyl-tRNA ligase (EC:6.1.1.7) Tax=CG_Nomura_04
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=5803401 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
Alanine-tRNA ligase
cg1_0.2A_scaffold_77_19
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18650..19258)
DNA (609bp) protein (203aa)
Transglycosylase SLT domain protein n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L396_9BACT
lytic transglycosylase catalytic subunit Tax=CG_Nomura_04
lytic transglycosylase catalytic subunit
cg1_0.2A_scaffold_77_20
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19456..20889
DNA (1434bp) protein (478aa)
cysteinyl-tRNA synthetase Tax=CG_Nomura_04
cysteinyl-tRNA synthetase id=15190657 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
cysS; cysteinyl-tRNA synthetase
cg1_0.2A_scaffold_77_21
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21098..21775)
DNA (678bp) protein (226aa)
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=CG_Nomura_04
ABC transporter, ATPase subunit; K02003 id=14198 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
ABC transporter, ATP-binding protein
cg1_0.2A_scaffold_77_22
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21778..23037)
DNA (1260bp) protein (420aa)
ABC-type transport system permease component LolE n=1 Tax=uncultured bacterium CSLC2 RepID=Q8KP05_9BACT rbh
ABC transporter permease Tax=CG_Nomura_04
ABC transporter, permease protein
cg1_0.2A_scaffold_77_23
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23041..24588)
DNA (1548bp) protein (516aa)
RND family efflux transporter, MFP subunit Tax=CG_Nomura_04
RND family efflux transporter MFP subunit id=5803398 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RND family efflux transporter, MFP subunit
cg1_0.2A_scaffold_77_24
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(24691..24978)
DNA (288bp) protein (96aa)
Tax=CG_Nomura_04
cg1_0.2A_scaffold_77_25
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(25024..26265)
DNA (1242bp) protein (414aa)
putative DEAD/DEAH box helicase domain protein Tax=CG_Nomura_04
DNA/RNA helicase, superfamily II id=2441916 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ATP-dependent RNA helicase RhlE
cg1_0.2A_scaffold_77_26
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26324..26425)
DNA (102bp) protein (34aa)
Tax=CG_Nomura_04
cg1_0.2A_scaffold_77_27
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26385..28184)
DNA (1800bp) protein (600aa)
GTP-binding protein TypA/BipA Tax=CG_Nomura_04
sdl:Sdel_2287 GTP-binding protein TypA; K06207 GTP-binding protein id=8196 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i rbh
GTP-binding protein TypA/BipA
cg1_0.2A_scaffold_77_28
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

28680..28943
DNA (264bp) protein (88aa)
Tax=CG_Nomura_04
cg1_0.2A_scaffold_77_29
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(29155..29346)
DNA (192bp) protein (64aa)
transmembrane_regions 12..34 Tax=CG_Nomura_04
transmembrane_regions 12..34 id=99248 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Displaying 29 items

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